Tc09v2_t004580.1

Overview
NameTc09v2_t004580.1
Unique NameTc09v2_t004580.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length810
Properties
Property NameValue
NoteInorganic pyrophosphatase 2
Model evidenceSupporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
Productinorganic pyrophosphatase 3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18588047
GenbankXM_018127042.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g004580Tc09v2_g004580Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p004580.1Tc09v2_p004580.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto429809auto429809Theobroma cacaoexon
exon-auto429810auto429810Theobroma cacaoexon
exon-auto429811auto429811Theobroma cacaoexon
exon-auto429812auto429812Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto429813auto429813Theobroma cacaoCDS
CDS-auto429814auto429814Theobroma cacaoCDS
CDS-auto429815auto429815Theobroma cacaoCDS
CDS-auto429816auto429816Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t004580.1 ID=Tc09v2_t004580.1|Name=Tc09v2_t004580.1|organism=Theobroma cacao|type=mRNA|length=810bp
ATGGCAGGGGTGGTGTTGGTTTTTGACTTTGACAAGACAATCATCGAATG
CGACAGTGATGATTGGGTTGTGGAAGGGTTTGGTGTTTCTGAGCTGTTCA
CTCAACTCCGGCCTACTTTCCCCTTGAACACTCTCATGGATAGAATGATA
ATGGAGGTCCAGTCTAGGGGAAACTCAACTGCGGATATCGCCGCCTGTTT
AAGACGGGTTCCATTACATCCCAGAATTGTCTCTGTTATTAAAGCGGCCC
ATGCTTCGGGGTGTGATCTGAGGATAATAAGTGATGCCAACGTCTTCTTC
ATCGAGACAATCTTGAAGAATCATGGACTGTTGGATTGTTTCTCGGAAAT
CAACACGAACCCTAGTTATGTTGATGGAGAAGGCAGGCTTAGAATCTCTC
CTTACCATGATTTCGAATCGTCTTCCCACGGCTGCAATATCTGCCCTCCC
AACATGTGCAAGGGTCTGATCATGGAAAGAGTTCAAGCCTCTGTTTCTGC
CACCGGAAAGAAAAGGTTTATCTATCTGGGCGATGGAACTGCTGATTTTT
GCCCGGGTTTGAAACTCGGAGAGGATGATTTCCTGATGCCGAGGAAGAAT
TTTCCAGTGTGGGAGCTGATTTGCAGCAACCCCAAACTCATCAGAGCAAA
CATTCACGAATGGAATGACGGGGAGGAGCTTGGCGATGTCCTGTCCCGTT
TAGTCAACAAAATCTCAATTGAAGAGAACTACGCTGTTGGGGTCGATCAG
ATGGTTCCCGTTCATTGTAAATTCAAGACAAGCTCGGTCCCTGCCCATGC
AGCCTTTTGA
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protein sequence of Tc09v2_p004580.1

>Tc09v2_p004580.1 ID=Tc09v2_p004580.1|Name=Tc09v2_p004580.1|organism=Theobroma cacao|type=polypeptide|length=270bp
MAGVVLVFDFDKTIIECDSDDWVVEGFGVSELFTQLRPTFPLNTLMDRMI
MEVQSRGNSTADIAACLRRVPLHPRIVSVIKAAHASGCDLRIISDANVFF
IETILKNHGLLDCFSEINTNPSYVDGEGRLRISPYHDFESSSHGCNICPP
NMCKGLIMERVQASVSATGKKRFIYLGDGTADFCPGLKLGEDDFLMPRKN
FPVWELICSNPKLIRANIHEWNDGEELGDVLSRLVNKISIEENYAVGVDQ
MVPVHCKFKTSSVPAHAAF*
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