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Properties
Property Name | Value |
Note | Protein translocase subunit SECA2, chloroplastic |
Model evidence | Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments |
Product | protein translocase subunit SECA2, chloroplastic, transcript variant X4 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc08v2_t011190.1 ID=Tc08v2_t011190.1|Name=Tc08v2_t011190.1|organism=Theobroma cacao|type=mRNA|length=5355bp ATGGAGTCGCAGGAGTTACCGGAGTGTCCGGTGTGCTTGCAACCGTACGA CGGCGTGTGTGCGATCCCACGGGTGCTCGCGTGTGGCCACACGGTGTGCG AAACCTGCCTTGTAAACCTCCCCCAGAAGCTCCCGGGAGCAATCCGCTGC CCCGCGTGTACTGTGCTCGTCAAGTACCCTCCAGAGGGCCCCTCGACTCT TCCCAAGAACATCGAACTCCTCAGACTCATCCCCGGGTCTGGAAGTACCC GAAAACACGTCAACAAATCCCCACATGACTCCCGTGTCCCTTTCCTCCCT CGCTCTTGGTCAGACGAGTTTTACTCCAATTGGAAAATCTACATTCTCCC TAGTGACGCTGTTGAGAGACAAAAAGTAAGTCTTTTGGCCGTTGGGTCTT TTTCAACTGGGGGTGAGGGTGGTTCTGGGTTTACGGCTGGCTATTTTGTT AGAGTTATGGATTGTTTGAGTGGAATGAAGGAGGGGGAAAGAGAGGAGTT GGGTTTAGTTTTAAGTGCCTTTAATAAACAAAGTAGTAGAATTTGTAGGG TTTTGGGTTTATGGGGTGATCCTGGAGATGGGATTTTGTATATAGTGAGT GAGAAGCAAGAATATGGGAACTTTTTGGATAAAAACTTGGGTGCTTTTGA AAAGGATGGGTTTTTTAATTTTGCAATGATAGGTATGGAAATATGTGAGG CAGTTATTGCTTTACATAAAGAAGGGTTAATTGCTGGTTGTTTAGGTTTT TCTTGCTTTCAGTTTGATGATTTTGGGCACGTATGTCTGAATTTGAGTGA GGTGTTATTGATTGGAAGGGAAGTTCTTGAAGTTGTTGCAAAGGTGGGTT CTAGTGGGAAAAAGATTGGTGATGGAGAAATTGTTTTGTTGATAACAGAT TTGTTTAAAAGGGATGTGTTTGTTAGCCCTGAGGTGTTGCTTGAGCTGTC GGAGAAAGAGGGTATTGTGGTAGAGCGTGGTAGCTCAAGATATTCAATAA GGTATAGCTCGGATGTCTGGCTGTTAGGTTGTATTTTTCTTAGGATTCTC GTTGGGGAAGTTTTTAGTGATGAGTTGGTTGATTACATGTGTCATATTAT TGTGAAAGGAAGTGAAAATAATGAATTGGATTGTTCAAGTGCTTACATGA GTTTGATGGAGAAAGTGAGCTCTTTGTTGGGAACTAAATTTGGTTCAGAA CATGTGTCATTGCAACAGATTCTTTGTAAATGTTTGGAGTTTAATCCAAA AAATCGTTCACTTGTGACAGATGTGTGGAAATATATTAGGGAGCTGGTTA TTAAACCTCAGTTTGATAAAATGGTCAAATTGGATGGAGCAAGTTATGAT GAGAATAGAGGTCGATGCTTAGTTGTTGGAAAATTGTTTCTGTTGTCCAG GGAAAGAATTGAAATACAGGAAAAAGATGTGTCACAAGGAATGGAAACAA ATGGTGCAGCAAATATGGTTATTGGTCTCACAGAGGGAAGCATTAAATCT AAAGATTTGCAAGGCCATCTTGATTGTGTTACAGGATTAGCTGTTGCAGG TGGTTATCTGTTCAGCTCCTCCTTTGATAAATCAGTCAAAGTATGGTCTC TGCAGGACTACTCTCATTTGCATACATTTAGAGGCCATGAGCATAAGGTC ATGGCTGTTGTCTGTGTGGATGAAGAACAGCCATTATGCATTAGTGGTGA TAGTGGTGGTGGTATATTTGTATGGAGCATTAGCATCCCTTTTGCACAAG AGCCATTGAAAAAATGGTATGAAGAAAAGGATTGGCGTTACAGTGGAATT CATGCTTTGGCAGTTTCAGAGATTGGATATTTATATACTGGAAGTGGAGA TAAATTGATTAAAGAATGGTCATTGCGGGATGGCACCTTTTCATGCTCTA TGAGTGGCCATAAATCTGTAGTTTCCACGCTAGCAGTGAGTAATGGAGTT CTTTACAGTGGGAGTTGGGATGGAACTGTTCGATTATGGAGTCTAAGTGA TCACAGTCTTTTGACAGTTTTAGGGGAAGACACATTGGGATCTGTGACCA CTGTCTTGTCTCTTGCAGCTGACATGAATACGCTTGTTGCTGCTTATGAA AATGGATCTGTTAAGATCTGGAGGGATGATGTATTTAGGAAATCTATACA AATACACAATGGTGCCATTTTTACTATTAGCTTGGAGGGGAAGTGGCTTT TTACAGGAAGTTGGGACAAGACCATCAAGGCACAGGAGTTAGCAGGAGAT GATTTTCAGGTGGACGTTAGACCTATTGGATCAATTCCTTGTGATTCTGT CATAACAGCTTTATCTTTCTGGGAAGGGAAGCTTTTTGTAGGTTTTGGTG ATAGGACTGTCAAGGAGGACGTGGGTCGTTTTAAGAAGACTTTGGGTGAT TTTATTAGCTTAAACTACTGGGTTGTTCGAGATTATTATCGTCTTGTCGA CTTTGTTAATGCACTCGAGCCAGAGATTCAGAGGCTATCTGATGAGCAGC TGACTGCTAAAACTTCTGAGTTTAAGAAAAGGTTGAGTCAAGGGGATAAT ATTTCCGATATTCAAGCTGAGGCATTTGCTGTTGTTCGGGAAGCTGCAAG AAGGAAGCTTGGCATGCGCCATTTTGATGTGCAGATTATTGGTGGAGCGG TACTTCATGATGGGTCCATTGCTGAGATGAAAACAGGGGAGGGAAAAACA TTGGTTTCCACATTAGCTGCATATCTTAATGCACTGACTGGTGATGGTGT CCATGTTGTAACTGTGAATGATTACCTTGCTCAACGTGATGCTGAGTGGA TGGGTCGAGTTCATCGCTTCTTAGGTCTTTCAGTTGGGCTTATTCAGAAG GGGATGACAGCTGAAGAGAGGAGAATCAACTACCAATGTGATATAACATA CACCAACAACTCAGAACTAGGCTTTGATTATCTTCGGGATAATCTTGCTG GAAATAGTGATCAACTTGTGATGAGATGGCCAAAACCATTTCATTTTGCA ATTGTTGATGAAGTTGATTCTGTTCTCATTGATGAAGGAAGAAATCCTTT GTTAATAAGTGGTGAGGCTAGTAAAGATGCTGCACGTTATCCGGTTGCTG CTAAAGTGGCTGAGCTGCTAACGAGGGGTCTGCATTATAATGTTGAGCTT AAAGATAATTCAGTGGAGTTGACTGAAGAAGGAATTGCACTTGCTGAGTT GGCTCTTGAAACGAATGATCTGTGGGATGAAAATGATCCCTGGGCAAGAT TTGTGATGAATGCTTTGAAAGCTAAAGAATTTTATCGGCGAGATGTCCAA TACATTGTCAGAAATGGGAAAGCTCTCATTATCAATGAGCTGACAGGCAG AGTTGAGGAGAAACGGAGATGGTCTGAAGGGATTCACCAGGCTGTAGAAG CAAAAGAAGGTCTGAAGATTCAGGCTGATTCAGTTGTTGTGGCTCAAATC ACCTACCAATCACTATTTAAGCTCTATCCAAAGCTTTCAGGGATGACTGG GACTGCAAAAACTGAAGAGAGGGAGTTCTTGAAAATGTTCCAGATGCCCG TTATTGAAGTGCCCACTAATCTTCCAAATATTCGTAAAGATTTACCCATA CAAGCTTTTGCTACTGCTCGAGGGAAATGGGAGTATGTTAGTCAAGAAGT GGAATACATGTTTAGGCAGGGCCGTCCAGTTTTAGTTGGGACCACTAGTG TTGAGAACTCTGAGTATCTGTCCGATCTGCTGAAGGAGAGAAATATCCCT CACAATGTCCTGAATGCGAGACCCAAGTATGCAGCAAGGGAAGCGGAAAT TATTGCCCAAGCAGGCAGAAAGTATGCTATAACTATTTCTACCAATATGG CTGGCAGAGGAACTGACATTATTCTTGGGGGTAATCCAAAAATGCTTGCA AGAGAAATTATAGAGGACAGCTTGCTTTCATTTCTGACAAGAGAAGCTCC TAATCTTGAAGCCGATGACATGGGAATTTCAAAAAAGGTGTTGTCCAAGA TAAAGGTTGGACCATCATCAATGGCTTTGTTAGCTAAGGCTGCCTTAATG GCAAAATATGTTGGCAAAAGTGAGGGAAAGAGCTGGACATATCAGGAGGC AAAATCTATCATTTCAGAGTCTGTGGAAATGAGCCAGTCAATGCCTTTGA AAGAGCTGAGGAAGCTTATTGATGAACAGTCTGAGATGTACCCTCTTGGC CCTTCTATAGCAATTACTTATTTGTCTGTTCTCAAAGATTGTGAAGTACA CTGCACCAAAGAAGGGTTTGAAGTGAAAAGGCTTGGGGGGCTTCATGTGA TCGGCACATCTTTGCATGAATCCCGTAGAATAGATAATCAGCTTCGTGGT AGAGCAGGAAGGCAAGGGGATCCTGGATCCACACGGTTTATGGTGAGCTT GCAAGATGAGATGTTTCAAAAGTTTAATTTTGATACTGAGTGGGCTGTGA AGCTTATTTCAAAAATTACAAATGATGAAGATATACCTATTGAAGGTGAT GCAATTGTAAAGCAGCTTTTGGCGCTTCAAATCAATGCAGAGAAGTACTT CTTTAACATAAGAAAGAGCCTGGTCGAGTTCGATGAAGTTTTAGAGGTTC AAAGAAAGCATGTCTATGACCTCAGGCAATTGATTTTGACGGGTGATAAT GAAAGTTGTTCTCAACATATTTTTCAGTACATGCAAGCAGTGGTAGATGA AATTGTCTTTGGAAATGCTGATCCACTGCAGCATCCAAGATACTGGAGTT TGGCTAAGCTTTTGAAAGAGTTCATTGCTATTGCAGGGAAGCTACTGGAC GACTCATTTGCATCAATTACAGAGGAAGATTTACTCCAATCTCTTAAACA GCTACATGAATCAAATTCTGTAGATATTGACAATCTTCACCTTCCAAACT TGCCTAAGCCTCCAGATTGCTTTAGAGGAATCCGCAGAAAAATTTCTTCA TTGAAGCGCTGGCTTGCTATTTGCTCTGATGATTCAACAAAGAATGGAAG GTACCGGCCAACAACTAATATTCTCCGCAAATACCTTGGGGATATTTTGA TTGCTTCATATTTGAACATCGTAGAAGAATCTGGTTATGATGATGCTTAC ATAAAAGAAATTGAGAGAGCAGTTCTTGTCAAGACTCTGGATTGTTTCTG GAGGGATCATCTTGTAAACATGAACAGGCTGAGTTCTGCGGTAAATGTAA GAAGTTTTGGGCACAGAAATCCTCTTGAAGAATATAAAATTGATGGGTGT CGATTTTTTATCTCAATGCTCAGTGCAACGCGAAGGTTAACTGTAGAATC ACTCTTGCATTATTGGTCATCCCCTATGGAGTCACAAGAGCTATTTTTAT CATAA back to topprotein sequence of Tc08v2_p011190.1 >Tc08v2_p011190.1 ID=Tc08v2_p011190.1|Name=Tc08v2_p011190.1|organism=Theobroma cacao|type=polypeptide|length=1785bp
MESQELPECPVCLQPYDGVCAIPRVLACGHTVCETCLVNLPQKLPGAIRC PACTVLVKYPPEGPSTLPKNIELLRLIPGSGSTRKHVNKSPHDSRVPFLP RSWSDEFYSNWKIYILPSDAVERQKVSLLAVGSFSTGGEGGSGFTAGYFV RVMDCLSGMKEGEREELGLVLSAFNKQSSRICRVLGLWGDPGDGILYIVS EKQEYGNFLDKNLGAFEKDGFFNFAMIGMEICEAVIALHKEGLIAGCLGF SCFQFDDFGHVCLNLSEVLLIGREVLEVVAKVGSSGKKIGDGEIVLLITD LFKRDVFVSPEVLLELSEKEGIVVERGSSRYSIRYSSDVWLLGCIFLRIL VGEVFSDELVDYMCHIIVKGSENNELDCSSAYMSLMEKVSSLLGTKFGSE HVSLQQILCKCLEFNPKNRSLVTDVWKYIRELVIKPQFDKMVKLDGASYD ENRGRCLVVGKLFLLSRERIEIQEKDVSQGMETNGAANMVIGLTEGSIKS KDLQGHLDCVTGLAVAGGYLFSSSFDKSVKVWSLQDYSHLHTFRGHEHKV MAVVCVDEEQPLCISGDSGGGIFVWSISIPFAQEPLKKWYEEKDWRYSGI HALAVSEIGYLYTGSGDKLIKEWSLRDGTFSCSMSGHKSVVSTLAVSNGV LYSGSWDGTVRLWSLSDHSLLTVLGEDTLGSVTTVLSLAADMNTLVAAYE NGSVKIWRDDVFRKSIQIHNGAIFTISLEGKWLFTGSWDKTIKAQELAGD DFQVDVRPIGSIPCDSVITALSFWEGKLFVGFGDRTVKEDVGRFKKTLGD FISLNYWVVRDYYRLVDFVNALEPEIQRLSDEQLTAKTSEFKKRLSQGDN ISDIQAEAFAVVREAARRKLGMRHFDVQIIGGAVLHDGSIAEMKTGEGKT LVSTLAAYLNALTGDGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQK GMTAEERRINYQCDITYTNNSELGFDYLRDNLAGNSDQLVMRWPKPFHFA IVDEVDSVLIDEGRNPLLISGEASKDAARYPVAAKVAELLTRGLHYNVEL KDNSVELTEEGIALAELALETNDLWDENDPWARFVMNALKAKEFYRRDVQ YIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQI TYQSLFKLYPKLSGMTGTAKTEEREFLKMFQMPVIEVPTNLPNIRKDLPI QAFATARGKWEYVSQEVEYMFRQGRPVLVGTTSVENSEYLSDLLKERNIP HNVLNARPKYAAREAEIIAQAGRKYAITISTNMAGRGTDIILGGNPKMLA REIIEDSLLSFLTREAPNLEADDMGISKKVLSKIKVGPSSMALLAKAALM AKYVGKSEGKSWTYQEAKSIISESVEMSQSMPLKELRKLIDEQSEMYPLG PSIAITYLSVLKDCEVHCTKEGFEVKRLGGLHVIGTSLHESRRIDNQLRG RAGRQGDPGSTRFMVSLQDEMFQKFNFDTEWAVKLISKITNDEDIPIEGD AIVKQLLALQINAEKYFFNIRKSLVEFDEVLEVQRKHVYDLRQLILTGDN ESCSQHIFQYMQAVVDEIVFGNADPLQHPRYWSLAKLLKEFIAIAGKLLD DSFASITEEDLLQSLKQLHESNSVDIDNLHLPNLPKPPDCFRGIRRKISS LKRWLAICSDDSTKNGRYRPTTNILRKYLGDILIASYLNIVEESGYDDAY IKEIERAVLVKTLDCFWRDHLVNMNRLSSAVNVRSFGHRNPLEEYKIDGC RFFISMLSATRRLTVESLLHYWSSPMESQELFLS* back to top
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