Tc08v2_t010810.2

Overview
NameTc08v2_t010810.2
Unique NameTc08v2_t010810.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length756
Properties
Property NameValue
NoteTwo-component response regulator ARR9 isoform 1
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Producttwo-component response regulator ORR9, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592359
GenbankXM_007019038.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g010810Tc08v2_g010810Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p010810.2Tc08v2_p010810.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto406815auto406815Theobroma cacaoexon
exon-auto406816auto406816Theobroma cacaoexon
exon-auto406817auto406817Theobroma cacaoexon
exon-auto406818auto406818Theobroma cacaoexon
exon-auto406819auto406819Theobroma cacaoexon
exon-auto406820auto406820Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto406821auto406821Theobroma cacaoCDS
CDS-auto406822auto406822Theobroma cacaoCDS
CDS-auto406823auto406823Theobroma cacaoCDS
CDS-auto406824auto406824Theobroma cacaoCDS
CDS-auto406825auto406825Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t010810.2 ID=Tc08v2_t010810.2|Name=Tc08v2_t010810.2|organism=Theobroma cacao|type=mRNA|length=756bp
ATGGAGTTGAAATCAGACAACATTCAAGACAGACCCGAACAGCAACAACA
GCAAATGCAGCAGCAGCAGCAGGAACAACAAGAACAACAGCACTTTCATG
TGCTGGCAGTTGATGACAGTGTTATTGACAGAAAGTTATTGGAGAAGCTC
CTCAAAGTTTCTTCATACCAAGTGACTTGTGTTGACTCTGGGGATAAAGC
TTTGGAATATCTGGGACTGCTTAATAACTTGGACTGTCACTCAACAACTT
CTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTGTTCCCAGTCT
TCGCAACAAGAGGGACTTAAAGTCAACTTAATCATGACAGACTTCTGTAT
GCCCGGAATGAGCGGCTATGATTTACTCAAACGTGTCAAGGGATCTTCTT
GGAAAGATGTACCAGTCGTGGTCATGTCATCAGAAAATGTACCTTCAAGA
ATTAGCATGTGCTTGGAAGGAGGAGCAGAAGAATTCCTGTTAAAGCCTCT
TCAATTATCAGACTTGGACAAAATTCAAGCTTACCTTGTGAAATCCCTTG
ATCATTCCTGTACAAACATGGACAAAGACTTGATCGGTGATAACAATGAC
AACGATGACAACAGCAATAACAACTACAGCGAGGACAGCAATAACGACAA
TGGCAATAGTAACAATAGCAACAATAATTTTAGCAAGAGGAAGGCAATAT
CTTCTGAAGCTACAGAGAGAAGACCAAAAATGAAAGGAGTAGCAGTAATA
GTATGA
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protein sequence of Tc08v2_p010810.2

>Tc08v2_p010810.2 ID=Tc08v2_p010810.2|Name=Tc08v2_p010810.2|organism=Theobroma cacao|type=polypeptide|length=252bp
MELKSDNIQDRPEQQQQQMQQQQQEQQEQQHFHVLAVDDSVIDRKLLEKL
LKVSSYQVTCVDSGDKALEYLGLLNNLDCHSTTSSSSSSSSSSSSSCSQS
SQQEGLKVNLIMTDFCMPGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSR
ISMCLEGGAEEFLLKPLQLSDLDKIQAYLVKSLDHSCTNMDKDLIGDNND
NDDNSNNNYSEDSNNDNGNSNNSNNNFSKRKAISSEATERRPKMKGVAVI
V*
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