Tc07v2_t011670.1

Overview
NameTc07v2_t011670.1
Unique NameTc07v2_t011670.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2391
Properties
Property NameValue
NoteEthylene receptor
Model evidenceSupporting evidence includes similarity to: 8 ESTs, 34 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Productethylene receptor, transcript variant X3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18594532
GenbankXM_018125098.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g011670Tc07v2_g011670Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p011670.1Tc07v2_p011670.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto375440auto375440Theobroma cacaoexon
exon-auto375441auto375441Theobroma cacaoexon
exon-auto375442auto375442Theobroma cacaoexon
exon-auto375443auto375443Theobroma cacaoexon
exon-auto375444auto375444Theobroma cacaoexon
exon-auto375445auto375445Theobroma cacaoexon
exon-auto375446auto375446Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto375447auto375447Theobroma cacaoCDS
CDS-auto375448auto375448Theobroma cacaoCDS
CDS-auto375449auto375449Theobroma cacaoCDS
CDS-auto375450auto375450Theobroma cacaoCDS
CDS-auto375451auto375451Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t011670.1 ID=Tc07v2_t011670.1|Name=Tc07v2_t011670.1|organism=Theobroma cacao|type=mRNA|length=2391bp
ATGGAGTCTTGCAACTGCATTGAGCCACAGTGGCCAGCGGATGAACTGTT
GATGAAATATCAATATATTTCTGATTTCTTCATTGCACTTGCTTATTTCT
CAATCCCTTTAGAGCTTATATACTTTGTCAAGAAATCTGCTGTGTTTCCA
TATAGATGGGTCCTTGTGCAGTTTGGAGCCTTTATAGTACTTTGTGGGGC
AACACATCTTATTAACTTGTGGACTTTTACAATGCATTCAAGAACTGTGG
CAGTAGTAATGACCACTGCAAAGGTTTTGACTGCTGTGGTATCATGTGCA
ACTGCCTTGATGCTTGTACATATTATTCCTGATCTGTTGAGCGTTAAAAC
TAGAGAACTATTTTTGAAAAATAAGGCTGCAGAGCTTGATAGAGAAATGG
GTCTGATTCGTACGCAAGAGGAAACAGGTCGACATGTTAGGATGCTTACT
CATGAGATAAGAAGCACTTTGGATAGACATACAATACTAAAAACCACTCT
TGTTGAATTGGGTCGAACTTTGGGTCTAGAAGAATGTGCCTTGTGGATGC
CAACACGTACTGGGTTAGAGCTCCAACTTTCATACACTCTTCGCCAACAG
AATCCAGTTGGGTATACTGTACCCATTCATCTACCTGTGATCAATCAAGT
ATTTAGTAGCAGTCGTGCGGTAAAAATATCCCCAAATTGTCCTGTGGCAA
GACTACGGCCTCTTTCAGGGAAGTATGTGCCTGGGGAGGTGGTTGCTGTC
CGTGTCCCACTCCTGCATCTCTCTAATTTCCAAATTAATGATTGGCCAGA
ACTTTCAACAAAACGCTATGCTTTGATGGTTTTGATGCTCCCTTCAGATA
GTGCAAGGCAATGGCATGGTCACCAGTTGGAGCTTGTTGAAGTGGTTGCT
GATCAGGTGGCAGTTGCTCTTTCGCATGCCGCAATCTTAGAAGAGTCAAT
GAGGGCTAGGGATCTTCTCATGGATCAGAATGTTGCACTTGATCTAGCCA
GAAGAGAAGCAGAGACAGCAATTCGTGCTCGAAATGATTTCTTGGCTGTT
ATGAATCATGAGATGAGAACCCCAATGCATGCGATTATTGCTCTATCTTC
TTTGCTGCAGGAAACTGAGTTGACACCTGAACAGCGTCTGATGGTTGAAA
CAATTCTTAAAAGTAGTAATCTTCTTGCTACTCTAATAAATGATGTATTG
GATGTTTCGAGGCTCGAAGATGGCAGCCTTCAACTAGACCTTGGAATTTT
TAACCTTTGTGCTGTATTCAGAGAGGTCCTTAACTTGATCAAGCCGATTG
CTTCTGTCAAAAAGCTTCATGTTTCATTAAATTTGGCTCCAGACTTGCCA
GAATATGCCATTGGCGATGAGAAGCGCCTGATGCAAACAATTTTAAACGT
TGTTGGTAATGCTGTGAAATTTACGAAGGAGGGCAGCATTTCAATCACTG
CTTTTGTTGCTAAATCAGAATCACTCAGAGATTCTCGAGCCCCTGAATTT
TTCCCTGTTCCAAGTGATAATCACTTTTATTTGCGTGTACAGGTGAAAGA
TTCAGGTTCAGGGATTAGCACTCAAGATATTCCCAAGTTATTTACCAAAT
TTGCACAAACTCAATCAACAGCAACACGAAATTCTGGTGGCAGTGGACTA
GGTCTTGCAATTTGTAAGAGGTACTTGTTTTTTCTGTGGACTTGCCATCT
CAGCCATGGTTATAGTCAGTTGACTACAGAGGCGGCTTTGGATCAACCTC
TGTACTGGTACTTTGAATATTTAGCTGTCCTCATGATGTTTAACCCTTCT
TATTATGTGATCAGGTTTGTAAATCTAATGGAGGGACATATTTGGATTGA
GAGTGAAGGCCTTGGTAAGGGATGTACTGCTATCTTCACTGTAAAACTCG
GGATCCCAGAACGCTTGAATGAATCTAAACTTCCCCTTATGCCTAAAGTG
TCATCAAATCATGGGCAGACATCTTTTTCTGGGCTTAAAGTTCTGGTTAT
GGATGAGAACGGGGTTAGCAGGATGGTGACTAAGGGGCTTCTCGTGCATC
TAGGGTTCGAGGTTACAATGGTAAGCTCCAGTGACGAGTGTTTGCATGTG
GTTTCTCACGAGCACAAGGTTGTTCTCATGGATGTATGTGTACCTGGCAT
GGATGGTTATGAAATTGCTGTCCAAATACATGAGAAATTCACAAAAAGCC
ATGAAAGGCCCTTAATAGTGGCGCTCACTGGAAATACAGACAAAGTAACA
AAAGAGAACTGCATGAGGGTTGGTATGGATGGTGTTATATTGAAACCTGT
TTCACTTGATAAAATGAGAAGTGTTTTATCGGATCTTCTGGAGCACCGAT
TTTTTCGAGGCCATATAGAGATGAAGAATATCGGTGATTGA
back to top

protein sequence of Tc07v2_p011670.1

>Tc07v2_p011670.1 ID=Tc07v2_p011670.1|Name=Tc07v2_p011670.1|organism=Theobroma cacao|type=polypeptide|length=797bp
MESCNCIEPQWPADELLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFP
YRWVLVQFGAFIVLCGATHLINLWTFTMHSRTVAVVMTTAKVLTAVVSCA
TALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLT
HEIRSTLDRHTILKTTLVELGRTLGLEECALWMPTRTGLELQLSYTLRQQ
NPVGYTVPIHLPVINQVFSSSRAVKISPNCPVARLRPLSGKYVPGEVVAV
RVPLLHLSNFQINDWPELSTKRYALMVLMLPSDSARQWHGHQLELVEVVA
DQVAVALSHAAILEESMRARDLLMDQNVALDLARREAETAIRARNDFLAV
MNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVL
DVSRLEDGSLQLDLGIFNLCAVFREVLNLIKPIASVKKLHVSLNLAPDLP
EYAIGDEKRLMQTILNVVGNAVKFTKEGSISITAFVAKSESLRDSRAPEF
FPVPSDNHFYLRVQVKDSGSGISTQDIPKLFTKFAQTQSTATRNSGGSGL
GLAICKRYLFFLWTCHLSHGYSQLTTEAALDQPLYWYFEYLAVLMMFNPS
YYVIRFVNLMEGHIWIESEGLGKGCTAIFTVKLGIPERLNESKLPLMPKV
SSNHGQTSFSGLKVLVMDENGVSRMVTKGLLVHLGFEVTMVSSSDECLHV
VSHEHKVVLMDVCVPGMDGYEIAVQIHEKFTKSHERPLIVALTGNTDKVT
KENCMRVGMDGVILKPVSLDKMRSVLSDLLEHRFFRGHIEMKNIGD*
back to top