Tc03v2_t018170.1

Overview
NameTc03v2_t018170.1
Unique NameTc03v2_t018170.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1185
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 1 EST, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
Productalcohol dehydrogenase-like 4
NoteAlcohol dehydrogenase-like 4
Cross References
External references for this mRNA
DatabaseAccession
GeneID18605954
GenbankXM_007039300.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g018170Tc03v2_g018170Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p018170.1Tc03v2_p018170.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto179265auto179265Theobroma cacaoexon
exon-auto179266auto179266Theobroma cacaoexon
exon-auto179267auto179267Theobroma cacaoexon
exon-auto179268auto179268Theobroma cacaoexon
exon-auto179269auto179269Theobroma cacaoexon
exon-auto179270auto179270Theobroma cacaoexon
exon-auto179271auto179271Theobroma cacaoexon
exon-auto179272auto179272Theobroma cacaoexon
exon-auto179273auto179273Theobroma cacaoexon
exon-auto179274auto179274Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto179275auto179275Theobroma cacaoCDS
CDS-auto179276auto179276Theobroma cacaoCDS
CDS-auto179277auto179277Theobroma cacaoCDS
CDS-auto179278auto179278Theobroma cacaoCDS
CDS-auto179279auto179279Theobroma cacaoCDS
CDS-auto179280auto179280Theobroma cacaoCDS
CDS-auto179281auto179281Theobroma cacaoCDS
CDS-auto179282auto179282Theobroma cacaoCDS
CDS-auto179283auto179283Theobroma cacaoCDS
CDS-auto179284auto179284Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t018170.1 ID=Tc03v2_t018170.1|Name=Tc03v2_t018170.1|organism=Theobroma cacao|type=mRNA|length=1185bp
ATGGATGTTGGTTACCATAAATCTTTTGAAAGCTCGTTTGAGTCGGCTGA
CACAACAGGGAAAGTCATCACTTGCAAAGCTGCTGTAGCATGGGGTCCTG
GACAGCCTCTTGTCATGGAAGACGTTCAAGTCGCTCCCCCTCAACAGATG
GAGGTCAGGGTCAAAATCCTCTTCACTTCAATCTGTCACACGGATCTCAG
TGCTTGGAAAGGCGAGAATGAAGCTCAGAGAGCATATCCTCGAATTCTAG
GCCATGAAGCTTCAGGAATCGTTGAGAGCGTTGGTGAAGGTGTTGAAGAC
ATGAAAAAGGGTGACCATGTCATTCCTGTCTTCCAAGGACAATGTGGCAA
GTGCATCTGCTGCAGAAATGAGAAAACTAATCTCTGCCAAAGGTTTGGAG
TGAATCCATTGAAAAGCGTGATGGTAAATGATGGCAAGACAAGGTTTTCA
ACCAAGGATGGGAATCCCATATTTCACTTTCTCAACACCTCCACTTTCAG
CGAGTACACTGTTCTTGATTCTGCCTGTGTTGTCAAGATCGATTTTGAGG
CCCCCCTTGAGACAATGAGCCTCTTGAGTTGCGGCGTCTCCACCGGAGTT
GGAGCTGCTTGGAATGTAGCCAACTTGCAACCCGGATCAACCGTGGCAAT
CTTTGGTTTGGGTGCCGTGGGACTCGCTGTAGCTGAAGGAGCGAGAGCAA
GAGGAGCATCAAAAATAATAGGTGTTGATATCAACCCTAACAAATTTGCC
AAAGGCAAAGCCGTGGGAATTACAGAATTCATTAACCCAAAGGATCTAGG
AGTGCCGGTGCACGAGAGAATTGGGGCTATGACTGATGGAGGTGTAGACT
ACAGCTTTGAGTGTGCGGGAAACCTTGAAGTTCTCCGCGAGGCATTTTTG
TCCACCCATACGGGATGGGGACTGACTGTACTATTGGGAATTCATCCAAG
CCCAATGTTGCTGCCTCTGCATCCAATGGAGTTGTTCAATGGGCGTCAAA
TCATAGGATCGATCTTTGGAGGCTTCAAAGGCAAAACCCAGCTACCAAAG
TTTGCCAAACAATGCATGTGTGGGACCCTAAACCTAGACGAGTTTATCAC
GCATGAGCTTCCCTTCGAGAAGATAAACGAAGCCTTTCAACTGCTAATTG
ACGGGAAGTCACTTAGATGCCTTTTGCACCTCTAA
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protein sequence of Tc03v2_p018170.1

>Tc03v2_p018170.1 ID=Tc03v2_p018170.1|Name=Tc03v2_p018170.1|organism=Theobroma cacao|type=polypeptide|length=395bp
MDVGYHKSFESSFESADTTGKVITCKAAVAWGPGQPLVMEDVQVAPPQQM
EVRVKILFTSICHTDLSAWKGENEAQRAYPRILGHEASGIVESVGEGVED
MKKGDHVIPVFQGQCGKCICCRNEKTNLCQRFGVNPLKSVMVNDGKTRFS
TKDGNPIFHFLNTSTFSEYTVLDSACVVKIDFEAPLETMSLLSCGVSTGV
GAAWNVANLQPGSTVAIFGLGAVGLAVAEGARARGASKIIGVDINPNKFA
KGKAVGITEFINPKDLGVPVHERIGAMTDGGVDYSFECAGNLEVLREAFL
STHTGWGLTVLLGIHPSPMLLPLHPMELFNGRQIIGSIFGGFKGKTQLPK
FAKQCMCGTLNLDEFITHELPFEKINEAFQLLIDGKSLRCLLHL*
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