Tc02v2_t025470.1

Overview
NameTc02v2_t025470.1
Unique NameTc02v2_t025470.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2031
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Producttwo-component response regulator ORR21
NoteTwo-component response regulator ARR14 isoform 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18609890
GenbankXM_007045231.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc02v2_g025470Tc02v2_g025470Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc02v2_p025470.1Tc02v2_p025470.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto127631auto127631Theobroma cacaoexon
exon-auto127632auto127632Theobroma cacaoexon
exon-auto127633auto127633Theobroma cacaoexon
exon-auto127634auto127634Theobroma cacaoexon
exon-auto127635auto127635Theobroma cacaoexon
exon-auto127636auto127636Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto127637auto127637Theobroma cacaoCDS
CDS-auto127638auto127638Theobroma cacaoCDS
CDS-auto127639auto127639Theobroma cacaoCDS
CDS-auto127640auto127640Theobroma cacaoCDS
CDS-auto127641auto127641Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc02v2_t025470.1 ID=Tc02v2_t025470.1|Name=Tc02v2_t025470.1|organism=Theobroma cacao|type=mRNA|length=2031bp
ATGGCTACCATGCAGAGAGTGGCGCAGTCGAGTGTGAGCACGAGCGCCGC
TGCCACCAGCAGCTACGGTGGCTCGTCGTCGTGCAAAGGACCAGAGGTTG
TGATCTCCGATCAGTTCCCGGTTGGATTGAGGGTTCTGGTTGTGGACGAT
GACATTACTTGCTTAAGAATTCTCGAGCAGATGCTTCGCCGTTGCCTCTA
TATCGTTACCACTTGCTCCCAAGCCAAAGTTGCCCTGAACCTTTTACGTG
AGAGAAAAGGGTGTTTTGATGTTGTACTAAGTGATGTTTACATGCCCGAT
ATGGATGGTTATAAACTCCTTGAACATGTTGGGCTTGAAATGGATCTTCC
TGTAATTATGATGTCCACTGATGGGAAAACAAATGCTGTTATGAAGGGAA
TTAGACATGGGGCTTGTGATTATTTGATTAAGCCCATACGTGAGGAAGAA
CTGAAGAATATATGGCAGCATGTTGTTAGGAAGAAATGGAATGAGAATAA
AGAGCTGGAACATTCAGGAAGCTTAGATGATAATGACCGACATAAACGAG
GAAATGATGATGCTGAATATGCTTCTTCTGTTAATGATGGGGCAGATGTA
TCATTGAAACCTCAGAAAAAGAGGAGCAACACCAAAGAAGAAGATGATGG
TGAAATTGAAAATGATGATCCATCCGCATCAAAGAAACCACGTGTTGTTT
GGTCGGTGGAACTGCATCAACAATTTGTCAGTGCTGTAAATCAGCTAGGG
ATTGATAAGGCTGTTCCCAAGAGAATTCTTGAGCTCATGAATGTGCCTGG
TTTAACTAGAGAAAATGTTGCAAGCCATTTGCAGAAATTCAGACTATACT
TGAAGAGAATAAGTGGAGTAGCTCAACAAGGTGGAATTTCTAATTCACTT
TGTGGGCCGCTAGAACCAAATGTTAAAATTGGTTCACTTGGAAGGTTTGA
CATCCAAGCATTGGCTGCCTCTGGACAAATTCCTCCACAAACGTTAGCTG
CCCTTAATGCTGAGCTCTTAGGTCGACCAACAGGTAATTTAGTTACAGCA
ATGGACCAGCCAGCTCTTCTTCAAGCATCCCTTCAAGGGCCCAAGTGCAT
TCCAGTTGAGCATGGTGTGGCATTTGGTCAACCTCTAGTAAAATGCCAAT
CCAGCATTTCTAAACACTTCCCACAATCTATTGTATCCGTTGAAGATGTT
TCTTCTGGATTTGGAGCATGGCCCTCTAATAACATTGGTACAGCGGCTCC
CAGTAGCGGCCTTGGAGGGTTAAGTTCTCAGAACGGTAACATGCTTATTG
ATTTGTTGCAGCAGCAGCAGCAGCAACGACAACTCCAGAAATCGCAGCAG
CAGCAGCAATCTACTGTTCCTGAGCCCAGTCGTTCGATCAATGTGCAGCC
ATCTTGCCTTGTTGTACCCTCTCAGTCATCTGCTAGTTTTCAGGCAGGAA
ATAGTACTGTTTCCGTAAACCAGAATGGCACCTTTTGTAGGACTCCTGTT
ATTGATTACAGTCTTCTTTCATCTCAATCAAATAATTCTTCATTGAATAT
TGGGCAAGTCTCTGACGGGGATCTCCAAACTACAGGCGTTCTTAGTGGGT
ACATCCCCCCTACTTCCCTTTCTCCATCTGTGTCATCTTGCTCTCTGAAT
GCTGACAATTGTACTAGTCATCAAGTGCAAACCTCAAGCATGACATTTAA
AGCATCCAGGCATTTGCCAGGATTTGTCCATAGCATGTGTGATGTCCAAG
GTCCCTTTGGTGTTACTAAGTCTGGAGACGTATTTGATCAAGCTCATTTT
AGCAATCTTGGATATTTTAATAAAGAGGCTTGCCTTCCAACTCGGTTTGC
AGCTGATGAATTTCAATCACCAATGAGCAGCTCCTCTAGCCGCGGAAAAG
TCTTTGCCGAGAACACTGGTACCAGAGTGAAGCAGGAGCCAAGTATGGAA
TTTGTAGATAATGTGAAAGTGGGCATACCAATGCTACAACAATTTCCTCC
AAATGATCTCATGAGTGTTTTCACAGAATAG
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protein sequence of Tc02v2_p025470.1

>Tc02v2_p025470.1 ID=Tc02v2_p025470.1|Name=Tc02v2_p025470.1|organism=Theobroma cacao|type=polypeptide|length=677bp
MATMQRVAQSSVSTSAAATSSYGGSSSCKGPEVVISDQFPVGLRVLVVDD
DITCLRILEQMLRRCLYIVTTCSQAKVALNLLRERKGCFDVVLSDVYMPD
MDGYKLLEHVGLEMDLPVIMMSTDGKTNAVMKGIRHGACDYLIKPIREEE
LKNIWQHVVRKKWNENKELEHSGSLDDNDRHKRGNDDAEYASSVNDGADV
SLKPQKKRSNTKEEDDGEIENDDPSASKKPRVVWSVELHQQFVSAVNQLG
IDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRISGVAQQGGISNSL
CGPLEPNVKIGSLGRFDIQALAASGQIPPQTLAALNAELLGRPTGNLVTA
MDQPALLQASLQGPKCIPVEHGVAFGQPLVKCQSSISKHFPQSIVSVEDV
SSGFGAWPSNNIGTAAPSSGLGGLSSQNGNMLIDLLQQQQQQRQLQKSQQ
QQQSTVPEPSRSINVQPSCLVVPSQSSASFQAGNSTVSVNQNGTFCRTPV
IDYSLLSSQSNNSSLNIGQVSDGDLQTTGVLSGYIPPTSLSPSVSSCSLN
ADNCTSHQVQTSSMTFKASRHLPGFVHSMCDVQGPFGVTKSGDVFDQAHF
SNLGYFNKEACLPTRFAADEFQSPMSSSSSRGKVFAENTGTRVKQEPSME
FVDNVKVGIPMLQQFPPNDLMSVFTE*
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