|
Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns |
Product | cleavage and polyadenylation specificity factor subunit 6, transcript variant X1 |
Note | RNA-binding family protein isoform 1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
CDS-auto123280 | auto123280 | Theobroma cacao | CDS |
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc02v2_t023210.3 ID=Tc02v2_t023210.3|Name=Tc02v2_t023210.3|organism=Theobroma cacao|type=mRNA|length=1959bp ATGGATGCAATGGCTGAAGAACAAATAGATTTCGGAGATGAGGAGTATGG AGGGGGACAAAAGATGCAGTATCAGGGAAGTGGAGCCATACCTGCTCTTG CTGATGAAGAGATGATGGGGGAAGATGATGAATATGATGATCTCTACAAC GATGTTAATGTTGGAGAAGGCTTTCTTCAGTTGCAACGATCTGAGGCACC ACTACAACCAGGTGGCCTGGGCAGTACTGGACTTAAAGCTCAGAGAAATG AGGCTCCTGAACCGAGAGTTGAAGCTGGGGGTTCACAAGGGCTAAACATT CCAGGAGTTTCAGTTCAAGGGAAGCACCCCAATGTCAGTGCCCGTTATCC TGAGAAGGAGGAGCAGCCAGCTGTTAACAGACCAGAAATGGTATCTGGGA GTTATCCATCTGGGTCTTCTATTTCACAGAAGGGCAGTGTTACAGAGGGG ACCCATGATAAGCAAGTGAAAAATTTGGGTTTTCAAGGATTGACTTCAGC ATCCAACAAGGTTGGGATTGATCCTTCTGGTGTGCCTCAAAAGATTGCCA ATGACCCTGCTCAATCTCTAAATTCAGGTACTGGTGGTCCTCAAGGTCCT CCACATGTGCCACCTAATCAAATGGGTACGAATGTTAATCATCCTGTGAT GAACGAAAATCAGGTTCAGCCAGCTATAGAGAATGGTCCAACCATGCTGT TTGTTGGAGAACTCCATTGGTGGACAACTGATGCAGAGCTTGAGAGTGTT TTATCTCAATATGGAAGGTTGAAGGAGATTAAGTTCTTTGATGAGAAAGC TAGTGGTAAATCCAAAGGGTATTGTCAAGTTGAGTTCTATGATCCATCTT CTGCAGCTGTATGCAAAGAGGGAATGAATGGTTATATGTTCAATGGGAGA GCTTGTGTTGTGGCTTTTGCTTCACCACAGACATTGAAGCAGATGGGAGC TTCCTATATGAACAAAAACCAGGGCCAGTCTCAAGCACAGCCTCAAGGCA GGAGGCCAAATGAAGGTTTGGGGAGAGGGGGTAATCTGAATTACCAAAGT GGAGATGCAGGGAGGAACTACGGAAGGGGTGGCTGGGGACGGGGTGGTCA AGGAGGAGTCAACCGAGCTGGGGGTGGAGGACTAATGAGAGGAAGGGGAG GTGTAGGTGTAAAGAACATGGTTGGGATCTCGGCTGGAGTTGGAAATGGT GCTAATGGTGCAGGGGCCTATGGACAAGGACCGGGTCCTGCATTTGGTGG TCCTGCTGGTGGCATGATGCATCCACAGGGCATGATGGGAGCTGGGTTTG ACCCAACATATATGGTTCGAGGAGGTGGTTATGGAGGTTTTCCAGGACCT GGTTTTCCTGGCATGCTTCCTTCATTTCCAGCTGTTAATACAATGGGACT TGCTGGTGTAGCTCCGCATGTCAATCCTGCTTTCTTTGGCCGTGGAATGG CACCTAATGGGATGGGAATGATGGGTGCATCTGGAATGGATGGACCTCAT GCGGGAATGTGGACTGACGCAAGCATGGGTGGGTGGGGAGGAGATGAGCA TGGTCGCAGGACTAGAGAGTCTAGTTATGGCGGTGAAGATGGTGCTTCAG AGTATGGGTATGGAGATGCAAATCATGAAAAAGGAAGGTCGAGTGGTGCC TCTCGGGAAAAAGAGCGGGTTTCTGAGCGTGAGTGGTCAGGCAACTCTGA TAGGAGGCATCGTGATGAGAAGGAACGGGACTGGGACAGGTCTGAGAGGG AGCATAGGGAACACCGCTATAGGGAAGAAAAAGACAGCTACAGAGAGCAT CGACATCGAGAACGTGACTTGGATTATGATGATGACTGGGATAGGGGACA ATCTTCTTCAAGATCTCGGAGAAGGTCCCATGCAATGCCAGAAGAAGAGC ACAGGTCTCGATCAAGGGATGTGGACTATGGGAAGAAGAGACGCCTGCCA TCAGAATGA back to topprotein sequence of Tc02v2_p023210.3 >Tc02v2_p023210.3 ID=Tc02v2_p023210.3|Name=Tc02v2_p023210.3|organism=Theobroma cacao|type=polypeptide|length=653bp
MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYN DVNVGEGFLQLQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNI PGVSVQGKHPNVSARYPEKEEQPAVNRPEMVSGSYPSGSSISQKGSVTEG THDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGP PHVPPNQMGTNVNHPVMNENQVQPAIENGPTMLFVGELHWWTTDAELESV LSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGR ACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRPNEGLGRGGNLNYQS GDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNG ANGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGP GFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPH AGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKGRSSGA SREKERVSEREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREH RHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLP SE* back to top
|