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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns |
Product | DExH-box ATP-dependent RNA helicase DExH11, transcript variant X2 |
Note | DExH-box ATP-dependent RNA helicase DExH11 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc09v2_t025740.5 ID=Tc09v2_t025740.5|Name=Tc09v2_t025740.5|organism=Theobroma cacao|type=mRNA|length=4035bp ATGAAACCGATCCAAGCAGCAAACGGATTCAGTTTCCGAGTCGGATTCTC CGGCCACAGCGGCCACCTCAGAGTCGAGCCTCTCTACACCGAGGAGCGCG ATAACCCTATTAAAACTCTCCCCGACTTTGTTCTCCCACCTGCATTTCCC AGGGAAACACCGGAATCGATTAAGGAACATATAAAGGAGAAATATCTTTT GCCAAGATTGGACGATGAAGCTTTTTCTCCAGAAAAAGCTGGAAGGCAAT GGGATTTTGACTGGTTTGAAAGGGTAAAAATACCATTGGAGCCATCATTG CCAAGAACTGTTATGGTTCCAGTCTGGGAGTTACCCTTCAGACGGTGCAA AGGGGGATCAGTTGAAGGAAAGTGGGAACCTAATTCATTGCAGGTGGATG TATCAGAACTAATAGTTGGGGGTCAAGCTTCTGGTTCTTTTCCACACACG GTTGGTGGTGCTGCCAAGGATTTTGTAAGAGGAAGCATTAATAACCGACC TTTTCGTCCAGGAGGCTTGGAGGATCAATCTGTAGAGAGGATTCTTCCGG ATGGTGCATGTAATGGTGAGTGGGTTAGTGAGGTGCTAAATGGTGGTCCT GTTCAAACAATTCCTCCAGGCTTTAAGCAAGGGTTAAACCTTGGTGATCT TACGGCACATCCTTGCTTATGGAATGTTTACAAGGACCGAATTTCACTCA ATAACACATCAGTTGAAAAGAGTGAGTTGTCTGTACAATTTGACGACTTG TTCAAGAAAGCTTGGGAAGAGGATGTTACAGAATTTGAGAAAGATGGGCA TTCAACAGAATCAGATTCTGTTAAGTCAGAAGCTGAGGCGAACCAGGCTG ATGTTCTCAACAGTCTTGATACTGGATCATCTGCTTTGGATGAAATTTTA TCAGTTGAAGCAGAAAGATTAGATGAGAAAAGTGATGGGGGTGGTCAGCA ACAAAAGGAGGCTTGGGCTGTTAGTGGAGGTAGTGAAGGGATTGCTGATC ACTTTTACGAACTAGTTCCTGACATGGCAATTGAATATCCTTTTGAATTG GATACATTCCAGAAGGAGGCTATTTATTATTTGGAAAAGGGGGAGTCTGT TTTTGTGGCGGCTCATACATCTGCTGGAAAAACAGTTGTTGCAGAATATG CATTTGCTTTGGCGTCAAAACATTGCACTAGAGCTGTGTATACAGCTCCA ATTAAAACAATCAGCAATCAGAAGTATAGAGATTTCTGTGGGAAATTTGA TGTTGGTCTTCTTACTGGTGATGTTAGTTTGAGACCTGAGGCTTCTTGTC TCATCATGACGACTGAAATATTAAGGTCAATGCTTTATCGGGGTGCGGAT ATTATTCGCGATATTGAATGGGTTATATTTGATGAGGTGCACTACGTGAA TGATGTTGAAAGAGGCGTGGTTTGGGAAGAGGTCATAATCATGCTTCCAA AACATATTAACATCATCCTCCTTTCAGCCACGGTGCCGAATACAATTGAA TTTGCTGATTGGATTGGTCGGACGAAGCAAAAAAAAATTCGTGTCACTGG GACAACAAAAAGACCAGTCCCACTGGAGCATTGCCTGTTTTATTCTGGAG AACTTTACAAAATATGTGAAAGTGAAACTTTTATATCATTGGGACTAAAG GCTGCCAAAGATGCATACAAGAAAAAGAATTCCAATGCAATTAGTGGTGG TACTGCTTCGTATACTGGTTCTTCTGCAGTTCATGATGGGGCTCGAGGTC AGAAACGTGAAATTTCTAACCGAGGGAAACAAAATAAGCATTCTGGTCCA CAAAATTTGGGGCACTATTCTGGGACAGGTTGGGGGAATCAAGGCAGTGG AGGTGGCCAGAATAGTTGGGGATCTAGGAGATCAGCATGGTTGATGCTTA TTGACAAGCTTTCAAAGCAGTCACTATTACCTGTGGTTATATTTGGTTTC TCAAAGAACCAATGTGATAAATCAGCTGACAGCATCTCTGGGACTGACCT CACTAGTAGTTCTGAGAAAAGTGAGATCCGTGTTTTTTGTGATAAAGCTT TTTCACGGCTTAAGGGATCTGATCGCAATTTACCTCAGGTTGTCAGAGTT CAGAACCTTCTTTGCAGAGGAATTGGTGTGCATCATGCAGGTTTGCTTCC AATTGTCAAGGAAGTTGTTGAAATGCTCTTCTGTCGAGGTGTGATTAAGG TTTTGTTTTCAACAGAGACATTTGCCATGGGTGTTAATGCTCCAGCCAGA ACGGTTGTCTTTGATACATTAAGGAAGTTTGATGGCAAGGAATTTAGACA GTTACTCCCTGGGGAATACACTCAAATGGCAGGTCGTGCTGGCAGAAGAG GACTTGATAAAACTGGTACAGTTATTGTGATGTGCCGTGATGAAATCCCA GAAGAGAGGGATTTGAAACATGTTATAACTGGAACTCCAACTAATCTCGA ATCTCAGTTCCGATTGACATACATTATGATCCTACATCTTCTTCGTGTGG AAGAACTGAAGGTGGAGGACATGTTGAAACGGAGTTTTTCTGAATTTCAT GCTCAGAAGAAACTTCCAGAGCAGCAACAACGTCTATTGCGAAAGCTTGC ACAGCCAAAGAAAACTATAGAATGTATTAAAGGTGAACCTGCAATTGAAG AGTACTATGAGATGCATGCAGAAGCCGAGGAACACTACCGACAGATATCA AATGCTGTCATGCAGTCTCCTGTTGCCCAACAATTTCTTACTGTTGGGAG AGTGGTTGTGGTGAAATCTCAGTCAGCCCACGACCATTTACTTGGAGTTG TCGTAAAATCACCTTCTGCCAATAACAAACAATATATTGTGCAAGTTCTT AAACCTGATGTGCCATTAATGACTCAAACTCCCTCAAGCAGCAGTAACTT GCAAGATAAGAGAAGTGCTGACTTCCAACAAGGTTATGTGCTGCTACCAA AAGCTAAACGTGGTCTCGAAGAAGACTACCGCTTATCTACTGGTCCACGC AAAGGATCAGGTATCATCAACATAAAACTGCCTCACCATGGTGCTGCTGC AGGAGTGAGTTTTGAGGTCAGAGAAACTGATAATACAGAATTCTTATGCA TATGCAATAGCAAGATAAAAGTCGAGCAAGTTGGGATTCTTGAATATGGT AGCGATACTGCTTTCTCTAACGCAGTTCAGCAGCTGTTGAAATTGAAATC TAATGGAAACAAATATCCTCCAGCCTTAGATCCAATTAAAGATCTCAAAT TGAAAGACATGGATCTTGTTCAAAAATACTACAAGTGGACCCACCTACTG CAAAAAATGTCAGAGAACAAATGCCACGAATGTATTAAGTTGGAGGAGCA CATTAAGCTAGCTAGAGAGATTAAGAAGCATAAAGATGAAGTTAATGCTC TTGAATTTCAATTGTCTAATGAAGCGCTCCAACAGATGCCAGAATTTCAG GGCCGGATTGATGTTCTGAAGGAAATTGGTTGTATAGATGAAGACCATGT GGTTCAATTAAAAGGTCGTGTTGCCTGTGAGATGAATTCAGGGGAGGAAT TGATATGCACAGAATGTTTATTTGAGAATCAACTAGATGACCTGGAACCT GAAGAAGCGGTGGCTTTAATGTCGGCCTTCGTCTTTCAGCAGAAGAACAC TTCTGAACCTTCTCTTACATCAAAACTCTCTCAGGCCAAAAAAAGATTGT ATGACACAGCTATAAAACTTGGTAATCTTCAAGCAGGGTTCAAATTACAA ATAACACCTGAGGAGTATGCGAAAGAAAATCTCAAGTTTGGTCTTGTTGA AGTGGTGTACGAATGGGCAAAGGGAACTCCATTTGCAGAAATTTGTGAGC TCACGGATGTTCCTGAAGGCCTTATAGTGCGGACAATTGTCAGGCTGGAC GAGACTTGTCGTGAATTTAAAAGTGCTGCAGCTATAATGGGTAATTCATC ACTTTATAAGAAAATGGAATCTGCTTCCAATGCCATAAAGCGTGATATCG TCTTTGCTGCTAGTTTGTACATTACAGGAGTGTGA back to topprotein sequence of Tc09v2_p025740.5 >Tc09v2_p025740.5 ID=Tc09v2_p025740.5|Name=Tc09v2_p025740.5|organism=Theobroma cacao|type=polypeptide|length=1345bp
MKPIQAANGFSFRVGFSGHSGHLRVEPLYTEERDNPIKTLPDFVLPPAFP RETPESIKEHIKEKYLLPRLDDEAFSPEKAGRQWDFDWFERVKIPLEPSL PRTVMVPVWELPFRRCKGGSVEGKWEPNSLQVDVSELIVGGQASGSFPHT VGGAAKDFVRGSINNRPFRPGGLEDQSVERILPDGACNGEWVSEVLNGGP VQTIPPGFKQGLNLGDLTAHPCLWNVYKDRISLNNTSVEKSELSVQFDDL FKKAWEEDVTEFEKDGHSTESDSVKSEAEANQADVLNSLDTGSSALDEIL SVEAERLDEKSDGGGQQQKEAWAVSGGSEGIADHFYELVPDMAIEYPFEL DTFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAP IKTISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGAD IIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPKHINIILLSATVPNTIE FADWIGRTKQKKIRVTGTTKRPVPLEHCLFYSGELYKICESETFISLGLK AAKDAYKKKNSNAISGGTASYTGSSAVHDGARGQKREISNRGKQNKHSGP QNLGHYSGTGWGNQGSGGGQNSWGSRRSAWLMLIDKLSKQSLLPVVIFGF SKNQCDKSADSISGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVVRV QNLLCRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPAR TVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVIVMCRDEIP EERDLKHVITGTPTNLESQFRLTYIMILHLLRVEELKVEDMLKRSFSEFH AQKKLPEQQQRLLRKLAQPKKTIECIKGEPAIEEYYEMHAEAEEHYRQIS NAVMQSPVAQQFLTVGRVVVVKSQSAHDHLLGVVVKSPSANNKQYIVQVL KPDVPLMTQTPSSSSNLQDKRSADFQQGYVLLPKAKRGLEEDYRLSTGPR KGSGIINIKLPHHGAAAGVSFEVRETDNTEFLCICNSKIKVEQVGILEYG SDTAFSNAVQQLLKLKSNGNKYPPALDPIKDLKLKDMDLVQKYYKWTHLL QKMSENKCHECIKLEEHIKLAREIKKHKDEVNALEFQLSNEALQQMPEFQ GRIDVLKEIGCIDEDHVVQLKGRVACEMNSGEELICTECLFENQLDDLEP EEAVALMSAFVFQQKNTSEPSLTSKLSQAKKRLYDTAIKLGNLQAGFKLQ ITPEEYAKENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLD ETCREFKSAAAIMGNSSLYKKMESASNAIKRDIVFAASLYITGV* back to top
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