Tc09v2_t015120.3

Overview
NameTc09v2_t015120.3
Unique NameTc09v2_t015120.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length390
Properties
Property NameValue
NoteUncharacterized protein
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
Productuncharacterized LOC18589274, transcript variant X6
Cross References
External references for this mRNA
DatabaseAccession
GeneID18589274
GenbankXM_018126992.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g015080Tc09v2_g015080Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p015120.3Tc09v2_p015120.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto453056auto453056Theobroma cacaoexon
exon-auto453057auto453057Theobroma cacaoexon
exon-auto453058auto453058Theobroma cacaoexon
exon-auto453059auto453059Theobroma cacaoexon
exon-auto453060auto453060Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto453061auto453061Theobroma cacaoCDS
CDS-auto453062auto453062Theobroma cacaoCDS
CDS-auto453063auto453063Theobroma cacaoCDS
CDS-auto453064auto453064Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t015120.3 ID=Tc09v2_t015120.3|Name=Tc09v2_t015120.3|organism=Theobroma cacao|type=mRNA|length=390bp
ATGACTATGAGATTAAAGGACTTGTTGCAAGAGGAGCAATGCTTTCTGGT
CTTTCACATTGAATGCAGTTCAATGTATCATACTGCTGCTGAAGTGGGAT
GCCAGTGGGTCTTAAAAATGCATTCGAACTTTGGGTTTGAGGCAGATTTC
AATTTTCTGATGGCTACAATATTAAAGTTTAGGGAATTAAAAAGAAACAA
GGGATGGGGCATTCCGAGAATAGAACTTGGGACCTCTCACACCCAAAGCG
AGAATCAGACCACTAGACCAAATGCCCAATTGTTTATGATTGTTGTGTTT
TTTATGTATTTTTGGTTTTCTCCAATGGTTTCTGTTAATTTCAATGGACT
TGTCCTAAGTGGACCAACTCTTTCTGGTCTTGCACATTGA
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protein sequence of Tc09v2_p015120.3

>Tc09v2_p015120.3 ID=Tc09v2_p015120.3|Name=Tc09v2_p015120.3|organism=Theobroma cacao|type=polypeptide|length=130bp
MTMRLKDLLQEEQCFLVFHIECSSMYHTAAEVGCQWVLKMHSNFGFEADF
NFLMATILKFRELKRNKGWGIPRIELGTSHTQSENQTTRPNAQLFMIVVF
FMYFWFSPMVSVNFNGLVLSGPTLSGLAH*
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