Tc09v2_t015120.2

Overview
NameTc09v2_t015120.2
Unique NameTc09v2_t015120.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length405
Properties
Property NameValue
NoteUncharacterized protein
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
Productuncharacterized LOC18589274, transcript variant X3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18589274
GenbankXM_018126989.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g015080Tc09v2_g015080Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p015120.2Tc09v2_p015120.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto453046auto453046Theobroma cacaoexon
exon-auto453047auto453047Theobroma cacaoexon
exon-auto453048auto453048Theobroma cacaoexon
exon-auto453049auto453049Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto453050auto453050Theobroma cacaoCDS
CDS-auto453051auto453051Theobroma cacaoCDS
CDS-auto453052auto453052Theobroma cacaoCDS
CDS-auto453053auto453053Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t015120.2 ID=Tc09v2_t015120.2|Name=Tc09v2_t015120.2|organism=Theobroma cacao|type=mRNA|length=405bp
ATGATCATAGTTGCTCCTCATATTTTATCAGCGGACTTGTTGCAAGAGGA
GCAATGCTTTCTGGTCTTTCACATTGAATGCAGTTCAATGTATCATACTG
CTGCTGAAGTGGGATGCCAGTGGGTCTTAAAAATGCATTCGAACTTTGGG
TTTGAGGCAGATTTCAATTTTCTGATGGCTACAATATTAAAGTTTAGGGA
ATTAAAAAGAAACAAGGGATGGGGCATTCCGAGAATAGAACTTGGGACCT
CTCACACCCAAAGCGAGAATCAGACCACTAGACCAAATGCCCAATTGTTT
ATGATTGTTGTGTTTTTTATGTATTTTTGGTTTTCTCCAATGGTTTCTGT
TAATTTCAATGGACTTGTCCTAAGTGGACCAACTCTTTCTGGTCTTGCAC
ATTGA
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protein sequence of Tc09v2_p015120.2

>Tc09v2_p015120.2 ID=Tc09v2_p015120.2|Name=Tc09v2_p015120.2|organism=Theobroma cacao|type=polypeptide|length=135bp
MIIVAPHILSADLLQEEQCFLVFHIECSSMYHTAAEVGCQWVLKMHSNFG
FEADFNFLMATILKFRELKRNKGWGIPRIELGTSHTQSENQTTRPNAQLF
MIVVFFMYFWFSPMVSVNFNGLVLSGPTLSGLAH*
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