Tc09v2_t007470.2

Overview
NameTc09v2_t007470.2
Unique NameTc09v2_t007470.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length378
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
ProductEPIDERMAL PATTERNING FACTOR-like protein 4, transcript variant X1
NoteUncharacterized protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18588367
GenbankXM_007012723.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g007470Tc09v2_g007470Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p007470.2Tc09v2_p007470.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto436412auto436412Theobroma cacaoexon
exon-auto436413auto436413Theobroma cacaoexon
exon-auto436414auto436414Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto436415auto436415Theobroma cacaoCDS
CDS-auto436416auto436416Theobroma cacaoCDS
CDS-auto436417auto436417Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t007470.2 ID=Tc09v2_t007470.2|Name=Tc09v2_t007470.2|organism=Theobroma cacao|type=mRNA|length=378bp
ATGAAGCGAAGAACGTGTTATTTTCTCATTGTTGCTCTGCATATAATAAG
CTGGATTCTAGCATCAACCAGGTCTTTAGCATCGCATGATGTTGCTCCTC
AACAAGATAAAGTTCCAGAGTTCAAGGGGGGTCCCATTGACTCTAAACAG
GGTCTTGAAAGCAAGGGTGGAGTCGTTTATGGGAGCGAAGAAACATGTAG
TAGAATGCTGGGAAGACTTGGATCAAGGCCACCAAACTGTCGGCGCAAGT
GTGGACGCTGCACTCCTTGTGTGGCCACTCAAATTCCTGCAACTTCTGAT
AAACTGGGAATTCAATATGCCAATTATGAACCTGAAGGATGGAAATGCAA
ATGTGGCTCCACTTTCTTCAATCCATAA
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protein sequence of Tc09v2_p007470.2

>Tc09v2_p007470.2 ID=Tc09v2_p007470.2|Name=Tc09v2_p007470.2|organism=Theobroma cacao|type=polypeptide|length=126bp
MKRRTCYFLIVALHIISWILASTRSLASHDVAPQQDKVPEFKGGPIDSKQ
GLESKGGVVYGSEETCSRMLGRLGSRPPNCRRKCGRCTPCVATQIPATSD
KLGIQYANYEPEGWKCKCGSTFFNP*
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