Tc07v2_t006050.3

Overview
NameTc07v2_t006050.3
Unique NameTc07v2_t006050.3
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1668
Properties
Property NameValue
NoteMonodehydroascorbate reductase
Model evidenceSupporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Productmonodehydroascorbate reductase, seedling isozyme, transcript variant X3
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593828
GenbankXM_018125026.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g006050Tc07v2_g006050Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p006050.3Tc07v2_p006050.3Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto365781auto365781Theobroma cacaoexon
exon-auto365782auto365782Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto365783auto365783Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t006050.3 ID=Tc07v2_t006050.3|Name=Tc07v2_t006050.3|organism=Theobroma cacao|type=mRNA|length=1668bp
ATGGCTTTGTTCTACCCAGTTTTTGGAAGTCTGAAGATAATCTTTGGCCC
TTTTGAACAATGTTTGAACTGTAAAAAAAATTTTGAGGAAAATATGAAGA
TGATGAAACGACTGTCGGAAGAGTTAGACAGTCTTAAGGAAGATATTGAA
CTGAGAATAAGTGCAGAGTGTCATGCTGGGACAATGCAAACAGAAGAAGT
CAAAAACTGGCTAGAGGATGTCCAGAGGATCAAAAGTGAAACTGAAGTCA
TCGAACAGAAGGCGGGAGATAAGAAATTCCTCTCAGGTGCATTCCTAGGA
AAGAAGGTTGAGGTTAAGGTTGTGGAACTCAAGGCATTTCTTAAGAAAGG
TAAAACCTTTCTTGGCTTGGTAAAGTATTTCAGGTACATTATTATTGGTG
GTGGAGTTGCAGCAGGATATGCAGCTAGGGAGTTTGATAGGCAGGGCCTT
AAGCCAGGGGAGTTGGCAATTATTTCCAAAGAGGCTGTGGCTCCTTATGA
ACGTCCTGCACTGAGCAAGGGATATCTAAATCCTAAGGGAGCTGCAAGAC
TGCCTGAGTTCCATGTCTGTGTTGGAAGTGGAGGAGAGAGATTGCTTCCT
GGGTGGTATAAAGAAAAAGGAATTCAATTGTTCCTTAGTACAGAAATAGT
GAAAGTAAATCTTGGTTCTAGGACTCTGATAAGTGCTGCGGGAGAAACCT
TTAAGTATCAGACTTTGATAATTGCAACTGGTTCCACAGTAATAAGGTTG
ACAGATTTCAAGATAGAAGGAGCTGATGCCAAGAACATCTTCTACCTGAG
AGAACTTGAAGATGCTGATGAACTTGCAGAATCAATGAAAACAAAGAAGA
ATGGAAAGGCTGTGATTGTTGGAGGAGGATACATTGGTCTTGAAGTTGGA
GCAGCTATGAGAATCAACAATTTTGATGTCAGCATGATTTACCCTGAACC
TTGGTGCATGCCTCGGCTTTTCACACCAGCTATAGCTGCTTTTTATGAAA
GTTATTATGCAAATAAAGGAATCAAAATTATCAAGGGAACAGTGGCAGTT
GGCTTCAACGCTAATCCCAATGGAGAGGTGACAGGAGTGAAACTTAACAA
TGGCAGGGTGCTTGAAGCTGACATTGTTGTTGTTGGTGTTGGGGCAAGAC
CCCTTACCACATTGTTCAAAGGGCAGGTTGAAGAGGAGAAAGGTGGAATC
AAAACCGATAAATTCTTCAAGACAAGCATGCCTGGTGTGTATGCTGTGGG
AGATGTGGCTGCCTTCCCAATTAAACTGTATAATGAGGTGAGGAGAGTTG
AGCATGTTGACCATGCCCGCAAATCTGCTGAGCAGGCTGTCAAGGCTATC
AAGGCAAGTGAAACAGGGAAAGAAATCGAAGAGTATGATTACCTTCCATA
CTTTTACTCTCGTTCCTTTAACCTGTCATGGCAGTTCTATGGAGACAATG
TTGGTGACACTGTGCTATTCGGAGACAACAATCCATCATCACCAAAGCCT
AAGTTTGGGTCTTTCTGGATCAAAGATGGAAAGGTGGTAGGAGCTTTCCT
AGAGGGTGGAACCCCTGAAGAGAACAAGGCTATGGCAAAAATTGCTAGGC
TCCAACCTCGAGTTGAGAACGTAGATCAACTGAAAAAGGAAGGTCTTGCC
TTTGCCAGTAAGATTTAA
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protein sequence of Tc07v2_p006050.3

>Tc07v2_p006050.3 ID=Tc07v2_p006050.3|Name=Tc07v2_p006050.3|organism=Theobroma cacao|type=polypeptide|length=556bp
MALFYPVFGSLKIIFGPFEQCLNCKKNFEENMKMMKRLSEELDSLKEDIE
LRISAECHAGTMQTEEVKNWLEDVQRIKSETEVIEQKAGDKKFLSGAFLG
KKVEVKVVELKAFLKKGKTFLGLVKYFRYIIIGGGVAAGYAAREFDRQGL
KPGELAIISKEAVAPYERPALSKGYLNPKGAARLPEFHVCVGSGGERLLP
GWYKEKGIQLFLSTEIVKVNLGSRTLISAAGETFKYQTLIIATGSTVIRL
TDFKIEGADAKNIFYLRELEDADELAESMKTKKNGKAVIVGGGYIGLEVG
AAMRINNFDVSMIYPEPWCMPRLFTPAIAAFYESYYANKGIKIIKGTVAV
GFNANPNGEVTGVKLNNGRVLEADIVVVGVGARPLTTLFKGQVEEEKGGI
KTDKFFKTSMPGVYAVGDVAAFPIKLYNEVRRVEHVDHARKSAEQAVKAI
KASETGKEIEEYDYLPYFYSRSFNLSWQFYGDNVGDTVLFGDNNPSSPKP
KFGSFWIKDGKVVGAFLEGGTPEENKAMAKIARLQPRVENVDQLKKEGLA
FASKI*
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