Tc06v2_t009290.2

Overview
NameTc06v2_t009290.2
Unique NameTc06v2_t009290.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1167
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Product5'-nucleotidase SurE, transcript variant X1
NoteAcid phosphatase
Cross References
External references for this mRNA
DatabaseAccession
GeneID18596155
GenbankXM_007024455.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc06v2_g009290Tc06v2_g009290Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc06v2_p009290.2Tc06v2_p009290.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto330660auto330660Theobroma cacaoexon
exon-auto330661auto330661Theobroma cacaoexon
exon-auto330662auto330662Theobroma cacaoexon
exon-auto330663auto330663Theobroma cacaoexon
exon-auto330664auto330664Theobroma cacaoexon
exon-auto330665auto330665Theobroma cacaoexon
exon-auto330666auto330666Theobroma cacaoexon
exon-auto330667auto330667Theobroma cacaoexon
exon-auto330668auto330668Theobroma cacaoexon
exon-auto330669auto330669Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto330670auto330670Theobroma cacaoCDS
CDS-auto330671auto330671Theobroma cacaoCDS
CDS-auto330672auto330672Theobroma cacaoCDS
CDS-auto330673auto330673Theobroma cacaoCDS
CDS-auto330674auto330674Theobroma cacaoCDS
CDS-auto330675auto330675Theobroma cacaoCDS
CDS-auto330676auto330676Theobroma cacaoCDS
CDS-auto330677auto330677Theobroma cacaoCDS
CDS-auto330678auto330678Theobroma cacaoCDS
CDS-auto330679auto330679Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc06v2_t009290.2 ID=Tc06v2_t009290.2|Name=Tc06v2_t009290.2|organism=Theobroma cacao|type=mRNA|length=1167bp
ATGACGACTACTTCTGTGAAGAAGAACATGTTACCTCCTGGTTTGGTTAA
CAATCTGCAAGAAGTTCTCCTTAGCAGAAAAGGAGGAAACAACAACAATG
AACAACAAAAGGATGATTCTGCTGCTGATTCTACTGAGCCATCTACTTCT
ACTTGTAATGAAGACGCTGCTGATGGTAACGACAGCTCCAAGCCTGTCGT
TTTGCTTACCAACGGGGAAGGGATTGACTCCCTTGGCCTTGTTTATCTCG
TTCAAGCTTTGGTCCGTTTAGGCCTCTACAATGTCCATGTTTGCGCTCCT
CAATCGGACAAATCTGTTTCGGGTCATTCAGTAACTCTCCGAGAAACAAT
TGCTGTTACTCCAGCCGAAATTGATGGCGCCACAGCTTATGAAGTATCAG
GGACTACTGTGGATTGCGTCTCCTTAGCCTTGTCTGGGGCACTATTCTCA
TGGTCAAAGCCTCTACTGGTAATTAGTGGAATTAATCGGGGATCAAGCTG
TGGTCATCACATGTTTTACTCAGGTGTTGTGGCTGGCGCTAGAGAAGCAT
TAATTTGTGGTGTACCCTCTTTGTCAATATCACTGAACTGGAAGAGGGAA
GAAAGCCAAGAAAGTGATTTTAAGGATGCAGTTGCTGTTTGTTTACCTTT
AATCAATGCAGCCATCAGAGATATTGAAAAGGGTGTTTTCCCTAAAAGTT
GCTTTCTAAGTATAGAAATCCCTACTTCTCCTTCAGCAAACAAGGGTTTT
AAATTGACCAAGCAAAGTTTTTGGAGATCTGCTCCAAGTTGGCAAGCTGT
TTCAGCTAATCGGCATCCTTCTGCTGCACATTTCATGTCTAATCAACAAA
GCCTTGGTATCCAACTTGCACAGCTTAGCCGAGATGCATCAGCTGCTGGT
GCTGCTCGCCGCTTGACCACACAAAGGAAGAACGTGGAGATAGAATCTGT
TGGGGCTGCTAAATCTGATACCAAGAAAGTGAAAAAGTACTTTCGATTGG
AGTTTGTTGATAGAGAACAGGAAGATACAGATGAGGATTTGGATTTCAGG
GCACTCGATAGCGGATTTGTTGCAGTAACTCCCCTATCACTTTCTCCACA
AATGGAATCAGACATTCAAACGGCTGCATCAGATTGGATCTCCAGTGCGC
TTCATGGGGAGCAATAG
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protein sequence of Tc06v2_p009290.2

>Tc06v2_p009290.2 ID=Tc06v2_p009290.2|Name=Tc06v2_p009290.2|organism=Theobroma cacao|type=polypeptide|length=389bp
MTTTSVKKNMLPPGLVNNLQEVLLSRKGGNNNNEQQKDDSAADSTEPSTS
TCNEDAADGNDSSKPVVLLTNGEGIDSLGLVYLVQALVRLGLYNVHVCAP
QSDKSVSGHSVTLRETIAVTPAEIDGATAYEVSGTTVDCVSLALSGALFS
WSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKRE
ESQESDFKDAVAVCLPLINAAIRDIEKGVFPKSCFLSIEIPTSPSANKGF
KLTKQSFWRSAPSWQAVSANRHPSAAHFMSNQQSLGIQLAQLSRDASAAG
AARRLTTQRKNVEIESVGAAKSDTKKVKKYFRLEFVDREQEDTDEDLDFR
ALDSGFVAVTPLSLSPQMESDIQTAASDWISSALHGEQ*
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