Tc03v2_t009260.1

Overview
NameTc03v2_t009260.1
Unique NameTc03v2_t009260.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1467
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Productenolase 1, chloroplastic
NoteEnolase 1, chloroplastic
Cross References
External references for this mRNA
DatabaseAccession
GeneID18604950
GenbankXM_007037673.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g009260Tc03v2_g009260Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p009260.1Tc03v2_p009260.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto158680auto158680Theobroma cacaoexon
exon-auto158681auto158681Theobroma cacaoexon
exon-auto158682auto158682Theobroma cacaoexon
exon-auto158683auto158683Theobroma cacaoexon
exon-auto158684auto158684Theobroma cacaoexon
exon-auto158685auto158685Theobroma cacaoexon
exon-auto158686auto158686Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto158687auto158687Theobroma cacaoCDS
CDS-auto158688auto158688Theobroma cacaoCDS
CDS-auto158689auto158689Theobroma cacaoCDS
CDS-auto158690auto158690Theobroma cacaoCDS
CDS-auto158691auto158691Theobroma cacaoCDS
CDS-auto158692auto158692Theobroma cacaoCDS
CDS-auto158693auto158693Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t009260.1 ID=Tc03v2_t009260.1|Name=Tc03v2_t009260.1|organism=Theobroma cacao|type=mRNA|length=1467bp
ATGGCCTTACCGACCCAAACTAATCTCCTTCAAAAACCGTTCCTTTCCCC
GCCTTCTCTTTCGCAACCTTCCGCATTTTCCGCCCCAGGGCCTATCCCTT
TCCGAAAATTCCGGCCCGCTTCTATCCAGTGCTCCGTAAAAGCCGCCCCG
TCTGTTACTGTGACGGCGTCAAAGGAATGCAAGGTCAAATCAGTCAAAGC
TAGGCAGATTATTGACAGCAGGGGCAATCCGACGATCGAGGTTGATTTGA
TCACCGATGATCGTTATCGATCAGCCGTCCCTAGCGGCGCCTCTACCGGG
ATCTATGAGGCGCTGGAGCTCAGAGACGGTGACAAGAGCGTCTATGGCGG
CAAAGGTGTGCTCTTCGCCGTTAAAAACATCAATGAAGTTTTGGGTCCTA
AGCTTATTGGCGTTGATGTTAGAAATCAAGCGGATGTAGATGCTGTTATG
CTGGAAATTGATGGGACCCCAAACAAGTCAAAACTTGGAGCTAATGCAAT
ATTGGGAGTGTCATTGAGCGTATGCAGAGCAGGTGCCGGGGCTAAAGGGA
TGCCATTGTACAAGCATATCCAGGAATTATCAGGAACAAAGGAGCTTGTT
ATGCCGGTTCCAGCATTTAATGTAATCAATGGAGGAAGTCATGCTGGAAA
TAATTTGGCTATGCAAGAATTTATGATACTACCAGTTGGTGCAACCTCCT
TTGCTGAGGCGCTTCGCATGGGAAGTGAAGTTTATCACACACTAAAGGGT
ATTATCAAAGCAAAATATGGACAAGATGCTTGTAATGTTGGAGATGAAGG
GGGATTTGCTCCTAATGTTCAGGACAACAGGGAGGGATTGGTTTTGCTAA
TGGATGCAATTCAGAAGGCTGGTTACACTGGAAAGATCAAAATAGGAATG
GACGTTGCAGCTTCAGAGTTTTTCACCAAAGATGGAAAATATGACCTGAA
CTTTAAGAAACAACCAAATGATGGAGCTTATGTGCGCTCAGCTCAGAGCT
TGGGTCAACTCTACAAAGAGTTTGTCAAAGACTTCCCTATCGTGTCTATT
GAAGATCCATTTGACCAAGATGACTGGAGCTCATGGTCTTCACTACAGTC
TTCTGTCGATATCCAACTTGTTGGAGATGATTTGTTAGTCACAAATCCAA
AGAGAATAGCTGAAGCCATTCAAAAGAAGGCTTGCAATGCCTTGCTTCTT
AAGGTTAACCAGATTGGCACAGTAACTGAATCCATTCAAGCAGCACTTGA
CTCGAAAGCTGCAGGATGGGGAGTGATGGTCAGCCACCGAAGTGGTGAAA
CAGAGGACAACTTTATTGCTGACCTTTCTGTTGGTTTGGCTAGCGGCCAG
ATCAAGACTGGAGCTCCTTGTAGAAGTGAGAGATTGGCCAAATACAATCA
GCTTCTTCGCATTGAAGAGGAACTTGGAAATGTTCGCTATGCTGGTGAAG
CTTTCAGATCTCCTTAG
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protein sequence of Tc03v2_p009260.1

>Tc03v2_p009260.1 ID=Tc03v2_p009260.1|Name=Tc03v2_p009260.1|organism=Theobroma cacao|type=polypeptide|length=489bp
MALPTQTNLLQKPFLSPPSLSQPSAFSAPGPIPFRKFRPASIQCSVKAAP
SVTVTASKECKVKSVKARQIIDSRGNPTIEVDLITDDRYRSAVPSGASTG
IYEALELRDGDKSVYGGKGVLFAVKNINEVLGPKLIGVDVRNQADVDAVM
LEIDGTPNKSKLGANAILGVSLSVCRAGAGAKGMPLYKHIQELSGTKELV
MPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEALRMGSEVYHTLKG
IIKAKYGQDACNVGDEGGFAPNVQDNREGLVLLMDAIQKAGYTGKIKIGM
DVAASEFFTKDGKYDLNFKKQPNDGAYVRSAQSLGQLYKEFVKDFPIVSI
EDPFDQDDWSSWSSLQSSVDIQLVGDDLLVTNPKRIAEAIQKKACNALLL
KVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLSVGLASGQ
IKTGAPCRSERLAKYNQLLRIEEELGNVRYAGEAFRSP*
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