Tc09v2_t010710.2

Overview
NameTc09v2_t010710.2
Unique NameTc09v2_t010710.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length414
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
Productsignal peptidase complex catalytic subunit SEC11C, transcript variant X2
NoteSignal peptidase I
Cross References
External references for this mRNA
DatabaseAccession
GeneID18588744
GenbankXM_018126563.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g010710Tc09v2_g010710Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p010710.2Tc09v2_p010710.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto444343auto444343Theobroma cacaoexon
exon-auto444344auto444344Theobroma cacaoexon
exon-auto444345auto444345Theobroma cacaoexon
exon-auto444346auto444346Theobroma cacaoexon
exon-auto444347auto444347Theobroma cacaoexon
exon-auto444348auto444348Theobroma cacaoexon
exon-auto444349auto444349Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto444350auto444350Theobroma cacaoCDS
CDS-auto444351auto444351Theobroma cacaoCDS
CDS-auto444352auto444352Theobroma cacaoCDS
CDS-auto444353auto444353Theobroma cacaoCDS
CDS-auto444354auto444354Theobroma cacaoCDS
CDS-auto444355auto444355Theobroma cacaoCDS
CDS-auto444356auto444356Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t010710.2 ID=Tc09v2_t010710.2|Name=Tc09v2_t010710.2|organism=Theobroma cacao|type=mRNA|length=414bp
ATGAAATCAACTCAGATTAGACAATTTCTCTATCAGGCCGTTAGCCTTGG
AATGATCATAGCATCGGCTCTGATGGTATGGAAAGGACTGATTTGCATTA
CTGGAAGCGAGTCGCCGGTGGTGGTCGTGCTTACTGGGAGCATGGAACCT
GGCTTCAAACGAGGAGATATATTGTTTCTGTATATGAGTAAGGATCCAAT
TCGTGCGGGAGAAATCGTCGTCTTTAATGATGGACGTAAAGTTCCCATTG
TGCATCGGGTGATTGAGGTTCATGAGCGGCGAGATACCAGAGAAGCTGAT
ATACTCACAAAAGGGGATGCTAACGACATGGATGACAGAGTTTTGTATAC
ATCGAGCCAACATTGGTTGCAACAGAAATACATCAAGGGGAGAGCTGTTG
GTACATACTTTTAA
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protein sequence of Tc09v2_p010710.2

>Tc09v2_p010710.2 ID=Tc09v2_p010710.2|Name=Tc09v2_p010710.2|organism=Theobroma cacao|type=polypeptide|length=138bp
MKSTQIRQFLYQAVSLGMIIASALMVWKGLICITGSESPVVVVLTGSMEP
GFKRGDILFLYMSKDPIRAGEIVVFNDGRKVPIVHRVIEVHERRDTREAD
ILTKGDANDMDDRVLYTSSQHWLQQKYIKGRAVGTYF*
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