Tc03v2_t021930.1

Overview
NameTc03v2_t021930.1
Unique NameTc03v2_t021930.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length213
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
ProductRNA polymerase II transcription factor B subunit 5
NoteRNA polymerase II transcription factor B subunit 5
Cross References
External references for this mRNA
DatabaseAccession
GeneID108660422
GenbankXM_018116706.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc03v2_g021930Tc03v2_g021930Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc03v2_p021930.1Tc03v2_p021930.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto187330auto187330Theobroma cacaoexon
exon-auto187331auto187331Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto187332auto187332Theobroma cacaoCDS
CDS-auto187333auto187333Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc03v2_t021930.1 ID=Tc03v2_t021930.1|Name=Tc03v2_t021930.1|organism=Theobroma cacao|type=mRNA|length=213bp
ATGGTCAACGCAACCAAAGGACTGTTCATTTCCTGTGACATTCCCATGGC
ACAATTCATCGTCAATTTGAATGCTTCAATGCCGGCATCACAGAAGTTTA
TTATACATGTCCTGGATAACACTCACTTCTTCGTGCAACCTCACGCCGCT
GAGATGATACGGAGTGCCATATCTGAGTTCAGAGACCAGAATTCCTACGA
GAAACCAACTTAA
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protein sequence of Tc03v2_p021930.1

>Tc03v2_p021930.1 ID=Tc03v2_p021930.1|Name=Tc03v2_p021930.1|organism=Theobroma cacao|type=polypeptide|length=71bp
MVNATKGLFISCDIPMAQFIVNLNASMPASQKFIIHVLDNTHFFVQPHAA
EMIRSAISEFRDQNSYEKPT*
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