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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns |
Product | 30-kDa cleavage and polyadenylation specificity factor 30, transcript variant X1 |
Note | 30-kDa cleavage and polyadenylation specificity factor 30 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc02v2_t001050.1 ID=Tc02v2_t001050.1|Name=Tc02v2_t001050.1|organism=Theobroma cacao|type=mRNA|length=2097bp ATGGATGACTCGGAGGGAGGTCTCAGCTTCGATTTCGAGGGCGGTCTCGA TGCGGGTCCCGCCGCGCCAACTGCCTCCATGCCCGTTGTCAACTCCGATC CTTCGGCCGCCGCCAACAACAACAGCAACAACAACTCGGCGGTCCCAGGC GCTGCCCCTACTTCGACAAATGATCCCGCCGCCGCTGTGGGTGGCGGAGG AGCTGGGCGAAGGAGCTTTCGTCAGACTGTATGCCGGCACTGGCTCCGCA GCCTCTGCATGAAGGGCGACGCCTGCGGTTTCCTTCACCAGTACGACAAG TCCCGCATGCCGGTCTGCCGGTTTTTTCGGCTTTTTGGTGAGTGCCGGGA GCAAGATTGTGTCTACAAACACACCAACGAGGATATTAAGGAGTGTAACA TGTACAAGCTAGGTTTTTGTCCTAATGGTGCTGACTGCCGATATAGGCAT GCAAAGCTCCCAGGACCTCCACCTCCTGTGGAAGAAGTCCTGCAAAAGAT TCAGCAATTGAGTTCTTACAATTATAACAAATTTTTTCAACAAAGGAATT CTGGCTTTGCCCAACAAACAGAAAAATCTCAGATTCCACAAGGACAAAAC AATGTAAACCAAGGAGCAGGTGGAAAACCTTCAACAACAGAATCTGCTAA CATGCATCCACAGCAGCAAGTTCAACAGCCTCCACAACAGGTCAGCCAGA CCCAGATACAAAATGTCCCCAACGGTCAGTCTAACCAGGCAAACAAAACT GCTATACCTTTGCCTCAAGGAATATCTAGGTATTTTATTGTTAAAAGTTG CAACCGCGAAAATCTGGAACTATCTGTTCAACAAGGAGTATGGGCAACTC AAAGAAGCAATGAGGCTAAACTGAATGAAGCTTTTGATTCTGCTGAAAAT GTGATTTTGATCTTCTCAGTTAATCGTACTCGGCATTTCCAGGGTTGTGC CAAGATGACATCAAAAATTGGTGGATCTGTTGCTGGAGGGAACTGGAAAT ATGCTCATGGAACTGCACATTATGGACGAAATTTCTCAGTAAAATGGTTA AAATTATGTGAGCTGTCCTTCCACAAAACTCGCCATTTGAGGAACCCCTA CAATGAGAACTTACCAGTAAAGATAAGTAGAGATTGTCAGGAGTTAGAGC CTTCTATTGGTGAGCAGTTGGCCTCCTTGCTTTATCTTGAGCCAGATAGT GAGCTTATGGCTATTTCGGTGGCAGCAGAATTAAAACGAGAAGAAGAGAA AGCAAAGGGAGTCAATTCAGATAATGGAGGAGAGAACCCGGACATTGTGC CATTTGAGGACAACGAAGAAGAAGAAGAGGAAGAAAGTGAGGAGGAGGAT GAAAGCTTTAGTGCTGCAGCTCAGGGAAGAGGAAGAGGCAGAGGAGTCAT GTGGCCCCCTCACATGCCACTTGCCCGAGGTGCCAGACCCATGCCTGGTA TGCGAGGTTTTCCACCTATGATGATGGGTGGTGATGGCTTTTCGTATGGA CCCGTAACACCTGATGGTTTTGGGGTGCCAGATCTTTTCGGTGCTCCCCG TCCTTTTCCACCATATGGGCCAAGGTTTTCTGGAGATTTCACAGGTCCTG CATCTGGCATGATGTTTCCAGGGCGACCTCCACAACCTGGGGCTATGTTT CCTGCTGGTGGACTTGGGATGATGATGGGTCCAGGTCGTGCTCCATTTAT GGGGGGTATGGGGCCCACAGGTGCAAATCCTGTTCGAGGTGGCCGCCCAG TCAGCATGCCCCCTATGTTTCCCCCACCCCCAGCACCTTCATCCCAGAAT TCTGGCCGGGCAGTTAAGAGAGATCAGAGGACACCAACCAATGACAGATA TGGTGCAGGATCAGAGCAGGGTAGAGGTCAGGAAATGGCTGGTCCGGGAG GCAGGTTGGATGATGAGACACAGTATCAGCAAGAAGGACAAAAGGCTCAC CACGAAGATCAGTTTGCTGCTGGAAACAGCTTCAGAAATGATGAGAGTGA AAGTGAGGATGAGGCACCGAGGAGGTCAAGGTATGGCGAAGGGAAGAAGA AAAGAAGAAGCTTAGAAGGAGATGATGCCAATGGTTCTGATCACTAG back to topprotein sequence of Tc02v2_p001050.1 >Tc02v2_p001050.1 ID=Tc02v2_p001050.1|Name=Tc02v2_p001050.1|organism=Theobroma cacao|type=polypeptide|length=699bp
MDDSEGGLSFDFEGGLDAGPAAPTASMPVVNSDPSAAANNNSNNNSAVPG AAPTSTNDPAAAVGGGGAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDK SRMPVCRFFRLFGECREQDCVYKHTNEDIKECNMYKLGFCPNGADCRYRH AKLPGPPPPVEEVLQKIQQLSSYNYNKFFQQRNSGFAQQTEKSQIPQGQN NVNQGAGGKPSTTESANMHPQQQVQQPPQQVSQTQIQNVPNGQSNQANKT AIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN VILIFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWL KLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDS ELMAISVAAELKREEEKAKGVNSDNGGENPDIVPFEDNEEEEEEESEEED ESFSAAAQGRGRGRGVMWPPHMPLARGARPMPGMRGFPPMMMGGDGFSYG PVTPDGFGVPDLFGAPRPFPPYGPRFSGDFTGPASGMMFPGRPPQPGAMF PAGGLGMMMGPGRAPFMGGMGPTGANPVRGGRPVSMPPMFPPPPAPSSQN SGRAVKRDQRTPTNDRYGAGSEQGRGQEMAGPGGRLDDETQYQQEGQKAH HEDQFAAGNSFRNDESESEDEAPRRSRYGEGKKKRRSLEGDDANGSDH* back to top
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