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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 5 ESTs, 52 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns |
Product | probable indole-3-acetic acid-amido synthetase GH3.1, transcript variant X2 |
Note | Probable indole-3-acetic acid-amido synthetase GH3.1 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc01v2_t005790.1 ID=Tc01v2_t005790.1|Name=Tc01v2_t005790.1|organism=Theobroma cacao|type=mRNA|length=1797bp ATGGCTGTTGATTCAACTCTCCCATCTCCGCTTGGCCCTCCCGCTTGTGA GAAGGATGCCAAAGCTCTTCAATTCGTTGAAGAGATAACCAAAAATGTTG ATTCTGTGCAAGAGAGGGTCTTGGGTGAGATCCTAAGTCGAAATGCAGAG ACTGAGTATCTCAAACGGTACAAGCTCAATGGAGCTACGGACCGGGACAC GTTCAAGTCTAAAATCCCCGTTGTCACTTATGAGGATCTCCAGCCTGAGA TCCAACGCATCGCCAACGGTGACAAATCTCCTATCTTATCTGCTCACCCA ATTTCAGAGTTTCTCACGAGTTCTGGGACTTCAGCTGGAGAAAGGAAATT GATGCCAACAATTCATGAAGAATTGGATCGCCGTCAACTCTTGTACAGTC TTCTCATGCCGGTGATGAACCTGTACGTTCCGGGATTGGACAAAGGGAAG GGTCTTTATTTCTTGTTTGTGAAAGCTGAAACAAAGACTCCTGGAGGGCT TTTGGCACGCCCTGTTCTCACAAGCTACTACAAAAGCGAACACTTTAAGA CCAGGCCATATGACCCTTTCAACGTTTACACCAGCCCCAACGAAGCCATT CTTTGCGCCGACTCTTTCCAGAGCATGTATAGCCAGATGCTCTGTGGGTT GATCATGAGGGAAGAGGTTCTTCGTGTTGGTGCCGTGTTCGCCTCTGGCC TACTCAGGGCCATTCATTTCCTTCAAATCAACTGGAAACAACTTGCTCAT GACATCACAACGGGAACCTTGAACCCTAAAGTAACAGATGCCTCAATTCG AGAATGTATGAGCAAAATCTTGAAGCCTAACCAGGAACTTGCTGAGTTCA TCACCAAGGAGTGCTTGGAGGAGAACTGGGAAGGTATTATCACTAGAATT TGGCCCAACACGAAGTACCTTGACGTGATCGTCACGGGAGCCATGGCTCA ATATATTCCCACACTGGAATATTACAGCGGTGGCTTGCCAATGGCTTGCA CCATGTACGCTTCGTCAGAGTGTTATTTTGGTCTTAACCTCAAGCCAATG TGCAAGCCATCCGAAGTCACGTACACTATAATGCCAAACATGGCTTACTT CGAGTTCTGGCCTCATGAATCATCCACTTCTGTTCTGTCTCGTGACTCGC CTCCACGCCTTGTTGATCTCGCTGATCTAGAAGTTGGCAAAGAATACGAG CTCATCATCACTACTTACGCGGGGTTGTGTCGTTACAGAGTCGGTGATAT CCTTCAAGTCACCGGTTTCCACAACGCAGCTCCACAATTTCGTTTCATTA GGAGAAAGAACGTTTTGTTGAGCATCGAGGCAGACAAGACTGATGAAGCT GAGCTGCAAAAGGCCATGGAAAATGCTTCCGTATTGCTTAAGGAATTCAA TACTAGCGTTGTTGAGTACACAAGCTACGCGGACACCAAAGAAATACCAG GTCATTACGTCATTTACTGGGAATTACTCATCAAAGACCCAGCTAATGCT CCGACGGATGCGGTTTTGAACCAATGCTGCTTACAAATGGAGGAATCATT GAACTCTGTGTACCGTCAAAGCCGAGTTGCAGACAACTCAATCGGCCCAC TCGAGATAAGAGTAGTGAAAGACGGCACATTCGAAGAGCTAATGGACTAC GCAATTTCAAGGGGTGCCTCCATAAATCAATACAAAGTTCCAAGATGTGT CAGCTTCACTCCAATCATGGAACTTCTCGACTCAAGGGTGGTTTCAAAAC ATTTCAGTCCAGCTTTACCACACTGGACCCCAGAACGTCGTCGTTGA back to topprotein sequence of Tc01v2_p005790.1 >Tc01v2_p005790.1 ID=Tc01v2_p005790.1|Name=Tc01v2_p005790.1|organism=Theobroma cacao|type=polypeptide|length=599bp
MAVDSTLPSPLGPPACEKDAKALQFVEEITKNVDSVQERVLGEILSRNAE TEYLKRYKLNGATDRDTFKSKIPVVTYEDLQPEIQRIANGDKSPILSAHP ISEFLTSSGTSAGERKLMPTIHEELDRRQLLYSLLMPVMNLYVPGLDKGK GLYFLFVKAETKTPGGLLARPVLTSYYKSEHFKTRPYDPFNVYTSPNEAI LCADSFQSMYSQMLCGLIMREEVLRVGAVFASGLLRAIHFLQINWKQLAH DITTGTLNPKVTDASIRECMSKILKPNQELAEFITKECLEENWEGIITRI WPNTKYLDVIVTGAMAQYIPTLEYYSGGLPMACTMYASSECYFGLNLKPM CKPSEVTYTIMPNMAYFEFWPHESSTSVLSRDSPPRLVDLADLEVGKEYE LIITTYAGLCRYRVGDILQVTGFHNAAPQFRFIRRKNVLLSIEADKTDEA ELQKAMENASVLLKEFNTSVVEYTSYADTKEIPGHYVIYWELLIKDPANA PTDAVLNQCCLQMEESLNSVYRQSRVADNSIGPLEIRVVKDGTFEELMDY AISRGASINQYKVPRCVSFTPIMELLDSRVVSKHFSPALPHWTPERRR* back to top
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