Tc10v2_t000210.1

Overview
NameTc10v2_t000210.1
Unique NameTc10v2_t000210.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length519
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productuncharacterized LOC18585726
NoteUncharacterized protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18585726
GenbankXM_007008690.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g000210Tc10v2_g000210Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p000210.1Tc10v2_p000210.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto486748auto486748Theobroma cacaoexon
exon-auto486749auto486749Theobroma cacaoexon
exon-auto486750auto486750Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto486751auto486751Theobroma cacaoCDS
CDS-auto486752auto486752Theobroma cacaoCDS
CDS-auto486753auto486753Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t000210.1 ID=Tc10v2_t000210.1|Name=Tc10v2_t000210.1|organism=Theobroma cacao|type=mRNA|length=519bp
ATGTCTCTGGTAGACTACGCATCCTCTTCAGACGACGACGTTTCAGACTC
CGAACGTGAACCACCACAACAACGCCATGAGCCACCGCCACCTCCACTCC
CGCGAGCCCCTTCCCCCCCTAAAACTCAGGCATCAGGGTCGTCGGCGGAT
CAAAAGCCCGAAACTTTTGAGAGTCTTCCAGATGCTTCGATGCTCTTGAA
CTCTCCGACGGTTTCATTGGTGAGCGGCAACGACCATGCATCTGTGGTAG
CGGCGGCGATGGCGGAAAGTGCGTCGCGTAAGAGAGACTCGAAGGGGATG
ATGGGGTTGGGTTCCGGTGGTGGTGCAGCAGCGGCACCAAGGGCTAAACT
TCCTAGAGCTACCTTACCTCATTCCAAGAGCGTTCCTGATACGGAAGGTG
GCCTCCTTGTTCCCCCTCAGCTCAAAGGAAGGAGTAATGTGGTCACAGAA
GATATCAGCAAGCTATTCGTCAGCAGACAGGCTGTTGCACAGCCTAGAGG
ACCTGAAAATCAGTCGTAG
back to top

protein sequence of Tc10v2_p000210.1

>Tc10v2_p000210.1 ID=Tc10v2_p000210.1|Name=Tc10v2_p000210.1|organism=Theobroma cacao|type=polypeptide|length=173bp
MSLVDYASSSDDDVSDSEREPPQQRHEPPPPPLPRAPSPPKTQASGSSAD
QKPETFESLPDASMLLNSPTVSLVSGNDHASVVAAAMAESASRKRDSKGM
MGLGSGGGAAAAPRAKLPRATLPHSKSVPDTEGGLLVPPQLKGRSNVVTE
DISKLFVSRQAVAQPRGPENQS*
back to top