Tc09v2_t015120.6

Overview
NameTc09v2_t015120.6
Unique NameTc09v2_t015120.6
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length264
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
Productuncharacterized LOC18589274, transcript variant X15
NoteHypothetical protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID18589274
GenbankXM_018126997.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g015080Tc09v2_g015080Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p015120.6Tc09v2_p015120.6Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto453091auto453091Theobroma cacaoexon
exon-auto453092auto453092Theobroma cacaoexon
exon-auto453093auto453093Theobroma cacaoexon
exon-auto453094auto453094Theobroma cacaoexon
exon-auto453095auto453095Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto453096auto453096Theobroma cacaoCDS
CDS-auto453097auto453097Theobroma cacaoCDS
CDS-auto453098auto453098Theobroma cacaoCDS
CDS-auto453099auto453099Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t015120.6 ID=Tc09v2_t015120.6|Name=Tc09v2_t015120.6|organism=Theobroma cacao|type=mRNA|length=264bp
ATGACTCTCGACCTACTACATGATCATAGTTGCTCCTCATATTTTATCAG
CGGCAGGATCCCTTTGTTTGGCAGGCTTAAGGTGATGGTCATCAGATTAC
AGGACTTGTTGCAAGAGGAGCAATGCTTTCTGGTCTTTCACATTGAATGC
AGTTCAATGTATCATACTGCTGCTGAAGTGGGATGCCAGTGGGTCTTAAA
AATGCATTCGAACTTTGGGTTTGACCGAAGCTATTTTTTTCTAAGCACAG
TACTTTTGGTTTGA
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protein sequence of Tc09v2_p015120.6

>Tc09v2_p015120.6 ID=Tc09v2_p015120.6|Name=Tc09v2_p015120.6|organism=Theobroma cacao|type=polypeptide|length=88bp
MTLDLLHDHSCSSYFISGRIPLFGRLKVMVIRLQDLLQEEQCFLVFHIEC
SSMYHTAAEVGCQWVLKMHSNFGFDRSYFFLSTVLLV*
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