Tc08v2_t012720.1

Overview
NameTc08v2_t012720.1
Unique NameTc08v2_t012720.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1041
Properties
Property NameValue
NoteUncharacterized protein isoform 1
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productuncharacterized protein C57A10.07
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592552
GenbankXM_007019355.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g012720Tc08v2_g012720Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p012720.1Tc08v2_p012720.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto411049auto411049Theobroma cacaoexon
exon-auto411050auto411050Theobroma cacaoexon
exon-auto411051auto411051Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto411052auto411052Theobroma cacaoCDS
CDS-auto411053auto411053Theobroma cacaoCDS
CDS-auto411054auto411054Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t012720.1 ID=Tc08v2_t012720.1|Name=Tc08v2_t012720.1|organism=Theobroma cacao|type=mRNA|length=1041bp
ATGAATAACTATCCATTCGGGTCAAATAGTCCTAAGTCCTTCAATGCATA
TCCAAGGGGTGATTTTGATCTAGAATCAGGAACTATCAAAAGAATCAGAA
GGCCTAGAAATTCATCATTTTACCCTATTAGAATGATTAAGTCCTTCGCT
AACCGGCTTCATTACTATTACAAGCTACATCCACTTCTTGTTTTCTTCAT
TTCCTTGTCATTTGGGGTCACGATCCTCATTGTTTTATCTCTATATGAGC
ACCACTATAGGATGCTGAGTAATTATAGGAAGCTTGATGATGGGTTCAAT
ATTAATTATCCCTTTGCCAAGCTTAAGAATCTTGTAATGGTTGCTGGACA
TTCGGTTTATACAAGTAGTAGTTGTGGGAAAGTTGATAAGGAGGATTCTT
GGTTTTTGGAGTCTTATCAGAAGAATCCAGGTCAGGCTGCTACTTTTTTG
GCTCACATAAATGAAGGGATAGAAATCACGGCAAGAGATGGTGAGGCTTT
GCTTTTGTTTAGTGGTGGAGAAACTCGAAAAGATGCTGGTCCTCGAAGTG
AGGCGCAGAGTTATTGGACAGTTGCTGAATCCAAAGGATGGTTTGGGAAG
GAAGAAAGTGTGAAGTGGAGGTCACTAACAGAGGAGCATGCAAGGGATAG
CTTTGAGAATCTTCTCTTTAGTGTTTGTCGGTTTCGAGAGCTTACTGGGA
CATACCCACACAACATAACTGTTGTAAGTTACGATTTCAAGGAAGAGAGG
TTTGCACACTTGCATCGCTCTGCCATTGGCTTTCCAGAGTCACGGTTCTT
CTACACAGGCACCCCAGCTTCAACATCTTCGAAAGAAGCAGCTTTGAAAG
GGGAGGCATTGGTGAGGATTCAATTTCAACAGGATCCATACGGATGTATC
GGACCACTTAAGAGGAAAAAAGTAGGCCGTGATCCCTTCCATCGGTCAAT
CCCTTATCCCAATGGATGCCGTGAAATTGAAGGTCTGTTTAGATATTGCG
GGGCTGCTCCTTATCCAGGTTCTCTGCCATGGGCATTGTAA
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protein sequence of Tc08v2_p012720.1

>Tc08v2_p012720.1 ID=Tc08v2_p012720.1|Name=Tc08v2_p012720.1|organism=Theobroma cacao|type=polypeptide|length=347bp
MNNYPFGSNSPKSFNAYPRGDFDLESGTIKRIRRPRNSSFYPIRMIKSFA
NRLHYYYKLHPLLVFFISLSFGVTILIVLSLYEHHYRMLSNYRKLDDGFN
INYPFAKLKNLVMVAGHSVYTSSSCGKVDKEDSWFLESYQKNPGQAATFL
AHINEGIEITARDGEALLLFSGGETRKDAGPRSEAQSYWTVAESKGWFGK
EESVKWRSLTEEHARDSFENLLFSVCRFRELTGTYPHNITVVSYDFKEER
FAHLHRSAIGFPESRFFYTGTPASTSSKEAALKGEALVRIQFQQDPYGCI
GPLKRKKVGRDPFHRSIPYPNGCREIEGLFRYCGAAPYPGSLPWAL*
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