Tc07v2_t000550.1

Overview
NameTc07v2_t000550.1
Unique NameTc07v2_t000550.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length345
Properties
Property NameValue
NoteHeavy metal transport/detoxification superfamily protein, putative
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
Productuncharacterized LOC18593213
Cross References
External references for this mRNA
DatabaseAccession
GeneID18593213
GenbankXM_007020321.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g000550Tc07v2_g000550Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p000550.1Tc07v2_p000550.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto355557auto355557Theobroma cacaoexon
exon-auto355558auto355558Theobroma cacaoexon
exon-auto355559auto355559Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto355560auto355560Theobroma cacaoCDS
CDS-auto355561auto355561Theobroma cacaoCDS
CDS-auto355562auto355562Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t000550.1 ID=Tc07v2_t000550.1|Name=Tc07v2_t000550.1|organism=Theobroma cacao|type=mRNA|length=345bp
ATGACGCAAAAGATAGTGATCAAGGTGAATATTCACTGTGAGAAATGTCG
AACGAAGGCTTTGAAGATAGCTGCTACGACACATGGTGTCAATGAGGTAG
CAATAAAAGGGAAAGCAAGAGATGAACTGACGGTGATTGGAAATGAAGTT
GATTCGGTTAAGTTGGCTTGTAGTCTTAGAAAGAAGCTTCGGAATGCTAC
CATAGTGAGCGTCGAAGAGAAGAAAGAGGAGAAGAAAGATGAGAAAAAAT
ATGAATATTTTCCAAGTTATTATGCCCACTATCCACAGTACTTAGTATCT
GAAGTGGCTCGCGATCCATACCAACCAACTTGTTCCATCATGTGA
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protein sequence of Tc07v2_p000550.1

>Tc07v2_p000550.1 ID=Tc07v2_p000550.1|Name=Tc07v2_p000550.1|organism=Theobroma cacao|type=polypeptide|length=115bp
MTQKIVIKVNIHCEKCRTKALKIAATTHGVNEVAIKGKARDELTVIGNEV
DSVKLACSLRKKLRNATIVSVEEKKEEKKDEKKYEYFPSYYAHYPQYLVS
EVARDPYQPTCSIM*
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