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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns |
Product | nuclear poly(A) polymerase 4, transcript variant X3 |
Note | Nuclear poly(A) polymerase 4 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc06v2_t008260.3 ID=Tc06v2_t008260.3|Name=Tc06v2_t008260.3|organism=Theobroma cacao|type=mRNA|length=1830bp ATGGTTGAAGATGCAAAAGCAGTCATTTTAACTTTTGGTTCTTATCGACT TGGGGTTCATGGACCTGGCTCTGACGTAGACACTTTATGTGTGGGACCAT CCTATGTGAACCGAGAGGAAGATTTCTTCTTTGTATTGCACAACATCCTG GCAGAAAGGGAAGAAGTTACTGAGCTACAACCTGTTCCAGATGCTCATGT CCCTGTAATGAAATTTAAGTTTGATGGAATATCAATTGACCTTCTTTATG CAAGCATCTCTCTTTTGGTTGTGCCTCAAGATCTTGACATCTCTGATGTG TCGGTATTGTACAATGTTGATGAGCCTACCGTTCGAAGTCTTAATGGCTG CCGGGTTGCAGATCAAATTCTGAAACTAGTTCCAAATGCTGAGCATTTTC GCACAACACTCCGATGTCTGAAGTTCTGGGCTAAAAGGCGTGGTGTTTAT TCTAATGTGACTGGATTTCTTGGTGGTGTTAATTGGGCTCTTCTTGTAGC TCGAGTTTGCCAGCTTTATCCCAATGCAGTTCCTATTATGCTTGTTTCAC GATTTTTTAGGGTCTTTACTCAGTGGCGTTGGCCAAACCCAGTTACGCTT TGTGCAATTGAAGAAGATGAACTTGGATTTTCTGTATGGGATCCTCGTAA AAATCCTCGTGATAGGACTCATCTTATGCCAATAATTACACCTGCCTATC CATGCATGAATTCTAGCTATAATGTATCTGCAAGCACCCTTCGAGTCATG ACGGAGCAGTTAAAATATGGTAACAACATTTGTGAGGAGATTCAGCTGAA TAGAGTAAAGTGGAGTGCTCTGTTTGAGCCTTATTTGTTCTTCGAAAGCT ACAAAAACTATCTTCAGGTTGATGTTGTTGCAGCTGATGCCAATGACTTG CGTGCTTGGAAAGGCTGGGTGGAATCCCGGCTAAGGCAGCTTACTTTGAT GATTGAGCGAGTCACTTATGGAAAGTTGCAGTGCCATCCTTATCCTCATG AGTATGTAGATGCATCTAAGCCATGTGCCTGTTGTGCCTTCTTTATGGGT TTACAAAGGAAACAGGGGGAAATAGTTCAGGAAGGTCAGCAATTTGATAT ACGAGGATCAGTTGATGAATTCCGGCATTCGGTAAGCATGTACATGTATT GGAAACCTGGGATGGAAATCCATGTATCGCATATTCGTAGAAAGCAGCTT CCGGCTTATGTTTTGCCAGATGGCTACAAACATCCTTGGAATCCACGGGT TACTCCCCACCATCAGTCTGATAAACTGTCCCATAACAATCATATTGCAT GTACTGAATCTGGTGGGAAATGCCTTAAAAGGAAAAAGGATCCTGAAGGA GAAAATAATGAGCATAGTAAGCCGGAGAAACGGCTGAATCTTGATGGTAG TGAATCTGTTTCTCCTGAGATTATTAGTTGTGAGCTTAGCAGAATGTCTT CAGGTTGTTCTACATCTGATTTAGATGAAATGAATGGAGTTGCTGAAGGG AATGCATCATCTAATTCCAGCACTATCAGCTCTTGCTCAAATGAGGATAT TGGGAATGAATCCAGTGAAGGGAGCAATGGAGGTGATAATGGGAGCATAG AAGGGATTACTATCCCAGCATCTTCTCAGAGTGATTCATGTGATGCAGAT TCAAAATCTTCTTTGGAGGATGAACATGCTGATCACAACAGAGTATTTGA AGATGGATTACAGAAAGAGTTAGAGCCTAATGCCGCTGTTGGTGTGGTTC TCAAGTCCATGAATGAAGCTGACTCAGAAACTGTGCAGAATACCGTGATA AGCAGGTTGAATTTGACGTCAACAGCATGA back to topprotein sequence of Tc06v2_p008260.3 >Tc06v2_p008260.3 ID=Tc06v2_p008260.3|Name=Tc06v2_p008260.3|organism=Theobroma cacao|type=polypeptide|length=610bp
MVEDAKAVILTFGSYRLGVHGPGSDVDTLCVGPSYVNREEDFFFVLHNIL AEREEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPQDLDISDV SVLYNVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKRRGVY SNVTGFLGGVNWALLVARVCQLYPNAVPIMLVSRFFRVFTQWRWPNPVTL CAIEEDELGFSVWDPRKNPRDRTHLMPIITPAYPCMNSSYNVSASTLRVM TEQLKYGNNICEEIQLNRVKWSALFEPYLFFESYKNYLQVDVVAADANDL RAWKGWVESRLRQLTLMIERVTYGKLQCHPYPHEYVDASKPCACCAFFMG LQRKQGEIVQEGQQFDIRGSVDEFRHSVSMYMYWKPGMEIHVSHIRRKQL PAYVLPDGYKHPWNPRVTPHHQSDKLSHNNHIACTESGGKCLKRKKDPEG ENNEHSKPEKRLNLDGSESVSPEIISCELSRMSSGCSTSDLDEMNGVAEG NASSNSSTISSCSNEDIGNESSEGSNGGDNGSIEGITIPASSQSDSCDAD SKSSLEDEHADHNRVFEDGLQKELEPNAAVGVVLKSMNEADSETVQNTVI SRLNLTSTA* back to top
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