Tc10v2_t010530.1

Overview
NameTc10v2_t010530.1
Unique NameTc10v2_t010530.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length966
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
ProductABSCISIC ACID-INSENSITIVE 5-like protein 2, transcript variant X1
NoteABSCISIC ACID-INSENSITIVE 5-like protein 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18586978
GenbankXM_007010604.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g010530Tc10v2_g010530Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p010530.1Tc10v2_p010530.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto506558auto506558Theobroma cacaoexon
exon-auto506559auto506559Theobroma cacaoexon
exon-auto506560auto506560Theobroma cacaoexon
exon-auto506561auto506561Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto506562auto506562Theobroma cacaoCDS
CDS-auto506563auto506563Theobroma cacaoCDS
CDS-auto506564auto506564Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t010530.1 ID=Tc10v2_t010530.1|Name=Tc10v2_t010530.1|organism=Theobroma cacao|type=mRNA|length=966bp
ATGGGAATTCAAACAATGGTGTCTCAAGGTGATAGCGGTAGTAATGGCAA
AGAGTCACAGTTTCAGCAGTTAACGCGGCAAAATTCAATGTATAGTCTCA
CGCTGGATGAGGTTCAAAATCAGCTGGGTGACTTGGGCAAACCTCTAAGT
AGCATGAACCTAGATGAGCTTCTCAAGAATGTATGGACAGCTGAGGCTAA
CCAGAATTATGGTATGGAAACTGAAGGCACAGCACTGACCAATCAAACTG
CTTTGCAGCGTCAGTCGAGTTTGTCACTAACTAGTGCTTTGAGCAAGAAG
ACAGTTGATGAGGTTTGGAGAGATATTCAACAAAGCAAAAATGATGGGGA
AAAGAAATATAGAGAAAGGCAGCCTACTCTCGGAGAGATGACATTGGAGG
ATTTCCTTGTGAAAGCAGGAGTTGTTGCTGAAGCTTCTACGGATAAAAAA
GGTGGTGGTTCTGTTGCTGGTGTTGATCTAAGTGTTGCACCACAGTTTGC
ACAGCAAGGTCAGTGGATGCAGTACCCACAACCACAATATCAGCACCCAC
AACAAAGTTTGATGGGGGTTTATATGTCAGCCCAGCCTATGCCACAGCCT
TTAACCATAGGGGCTACTGCTGTAATGGATGTCTCTTACCCAGATAACCA
GGTGCCATTGCCTTCACCATTAATGGGAACATTATCAGATACACAGGCAT
CTGGAAGGAAAAGAGGTGCCCCTGAGGATATGATTGAAAAAAATGTTGAC
AGGAGACAGAAGAGGATGATAAAGAACAGGGAATCTGCGGCACGTTCCCG
AGCGAGGAAGCAGGCTTACACTAATGAACTGGAGAACAAAGTTTCACGTC
TAGAAGAGGAAAATGCAAGGCTGAAGGACCGGAAGGAGCAAGAGATGAAG
CTGCCATCTGCACCACCTCCCGAACCAAAATATCAGCTTCGTAGAACGTC
ATCAGCCCCATTCTAA
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protein sequence of Tc10v2_p010530.1

>Tc10v2_p010530.1 ID=Tc10v2_p010530.1|Name=Tc10v2_p010530.1|organism=Theobroma cacao|type=polypeptide|length=322bp
MGIQTMVSQGDSGSNGKESQFQQLTRQNSMYSLTLDEVQNQLGDLGKPLS
SMNLDELLKNVWTAEANQNYGMETEGTALTNQTALQRQSSLSLTSALSKK
TVDEVWRDIQQSKNDGEKKYRERQPTLGEMTLEDFLVKAGVVAEASTDKK
GGGSVAGVDLSVAPQFAQQGQWMQYPQPQYQHPQQSLMGVYMSAQPMPQP
LTIGATAVMDVSYPDNQVPLPSPLMGTLSDTQASGRKRGAPEDMIEKNVD
RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENARLKDRKEQEMK
LPSAPPPEPKYQLRRTSSAPF*
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