Tc10v2_t000030.2

Overview
NameTc10v2_t000030.2
Unique NameTc10v2_t000030.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1854
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 65 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Productprobable serine/threonine-protein kinase At5g41260, transcript variant X8
NoteProbable serine/threonine-protein kinase At4g35230
Cross References
External references for this mRNA
DatabaseAccession
GeneID18585703
GenbankXM_018129530.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc10v2_g000030Tc10v2_g000030Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc10v2_p000030.2Tc10v2_p000030.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto485894auto485894Theobroma cacaoexon
exon-auto485895auto485895Theobroma cacaoexon
exon-auto485896auto485896Theobroma cacaoexon
exon-auto485897auto485897Theobroma cacaoexon
exon-auto485898auto485898Theobroma cacaoexon
exon-auto485899auto485899Theobroma cacaoexon
exon-auto485900auto485900Theobroma cacaoexon
exon-auto485901auto485901Theobroma cacaoexon
exon-auto485902auto485902Theobroma cacaoexon
exon-auto485903auto485903Theobroma cacaoexon
exon-auto485904auto485904Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto485905auto485905Theobroma cacaoCDS
CDS-auto485906auto485906Theobroma cacaoCDS
CDS-auto485907auto485907Theobroma cacaoCDS
CDS-auto485908auto485908Theobroma cacaoCDS
CDS-auto485909auto485909Theobroma cacaoCDS
CDS-auto485910auto485910Theobroma cacaoCDS
CDS-auto485911auto485911Theobroma cacaoCDS
CDS-auto485912auto485912Theobroma cacaoCDS
CDS-auto485913auto485913Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc10v2_t000030.2 ID=Tc10v2_t000030.2|Name=Tc10v2_t000030.2|organism=Theobroma cacao|type=mRNA|length=1854bp
ATGCTTTCCACTAATTTATACTTTTATTATTACTATTATTATTACGTAAT
GTTAACAAAAATCCTTCCTTGGAGTTATTATTTATACAAAAAACCCTATT
TTATATTATCACATCAAAAACTCACACTTGGAGTTAGTATTATTCTTTCA
ATTCACAACAAACAAAAAGGGCAAAAGTATTCACTTGGAACCCCCCATTC
AACTCCTCATTTTAGTCAACTTTCTTTCTTCCCACTCCTCAGTCCTGCCT
CCCCAAACTCTCAAGTCTTGTTCCAAGTTCCTACTATACTATACCACACT
TACTCTATACTCTACACTGGAGTCCTCCTGCTCCTGCTGCTCTTGCTTAT
ACTATTATATGTGAACAAAGGCAGACCAACAGTGATGGGCTGCTTTCAGT
CCAAAACCACCCATCTTCCATCCCCTGATCAAGATCCTCCTCCTCAAACC
AAGCCAGATCTAGATGGGGACGGGGAGCAGTCGTCATTGCCCGCATTCAA
GGAGTTCGGTCTGGTGGAGCTGCGGGCGGCGACCAACGGATTCAGCAGTG
AGCTGATAGTTTCAGAGAGCGGAGAGAAGGCTCCGAATGTGGTGTACAGA
GGGAAGCTGAAGAACAATCGAGTGGTGGCCATTAAGCGATTCTCGAGGCA
GTCATGGCCTGATCCTCACCAGTTCGTTAACGAAGCTGCTGGGGTTGGAA
AAGTCCGCCACAAAAGATTGGTCAATTTGATTGGCTGTTGCGCCGAGGGA
GACGAGCGCTTGTTGGTCGCTGAGTATATGCCTAATGATACCCTCTCTAA
GCATCTTTTCCACTGGGAGAAACAGCCTTTGCCATGGGAAATGCGCCTCA
GAGTTGCGTACCATATTGCACAAGCCCTTGATCACTGCAACGCTGAAAAC
CGTAAAATTTATCACGATTTAAATGCTTACAGAGTTCTTTTCGATGAGGA
TGGTGATCCTCGATTATCTAGTTTTGGATTGATGAAAAATAGCCGAGATG
GAAAAAGTTACAGTACTAATTTGGCTTATACTCCTCCGGAGTTTTTGAGG
ACAGGCAGGGTCATCCCTGAGAGTGTTATTTACAGTTATGGAACTGTTCT
CTTGGATCTCTTAAGTGGAAAGCATATTCCTCCCAGCCATGCATTGGACT
TGATAAGAGGAAAGAATTTATTGTTGTTAATGGATTCTTCTCTGGAAGGT
CAATATGCTAATGAAGATGCCAGCGAATTGGTTGAATTGGCTTCAAAATG
TCTTCAGTACGAGGCTAGAGATCGACCTGATATTGAATTCCTCCTTTCAG
CAGTGGTACCTCTTCAAAAGCAGAAAGAGGTTGCATCACATGTTCTAATG
GGTCTATCAAGAACCCCATCACTGTTGCCAACTATGCTTTCTGCACTTGG
AAAGGCATGTGCCAGGATGGATCTTACTGCAGTGCATGATATCTTGCTTA
AAACTGGTTATAGAGATGAAGAAGGTGCAGAAAATGAGCTGTCATTCCAA
GAGTGGACGCAACAGGTTCAAGATATGCTGAATACAAAGAAATTTGGGGA
TATTGCATTTAGAGACAAAGATTTTAAAAATGCTATTGATTACTACTCGA
AGTTGGTATCGATGATGTCTGTTCCTTCTGGTACTGTATTTGTGAGAAGA
GCCCTCTCATTCTTGATGATTGGTCAACCAGAATTTGCCTTGAGAGATGC
CATGCAGGCTCAGGTGTGCTTGCCCGAATGGCCCACTGCCTTCTACATGC
AAGCTCTTGCCCTCTCCAAGCTTGGAATGGAAACTGATGCGCAAGACATG
CTTAATGATGGAGCCTCATTTGAGGCAAAGAAGCAGAATGGCTGGCGTGT
CTAA
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protein sequence of Tc10v2_p000030.2

>Tc10v2_p000030.2 ID=Tc10v2_p000030.2|Name=Tc10v2_p000030.2|organism=Theobroma cacao|type=polypeptide|length=618bp
MLSTNLYFYYYYYYYVMLTKILPWSYYLYKKPYFILSHQKLTLGVSIILS
IHNKQKGQKYSLGTPHSTPHFSQLSFFPLLSPASPNSQVLFQVPTILYHT
YSILYTGVLLLLLLLLILLYVNKGRPTVMGCFQSKTTHLPSPDQDPPPQT
KPDLDGDGEQSSLPAFKEFGLVELRAATNGFSSELIVSESGEKAPNVVYR
GKLKNNRVVAIKRFSRQSWPDPHQFVNEAAGVGKVRHKRLVNLIGCCAEG
DERLLVAEYMPNDTLSKHLFHWEKQPLPWEMRLRVAYHIAQALDHCNAEN
RKIYHDLNAYRVLFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLR
TGRVIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNLLLLMDSSLEG
QYANEDASELVELASKCLQYEARDRPDIEFLLSAVVPLQKQKEVASHVLM
GLSRTPSLLPTMLSALGKACARMDLTAVHDILLKTGYRDEEGAENELSFQ
EWTQQVQDMLNTKKFGDIAFRDKDFKNAIDYYSKLVSMMSVPSGTVFVRR
ALSFLMIGQPEFALRDAMQAQVCLPEWPTAFYMQALALSKLGMETDAQDM
LNDGASFEAKKQNGWRV*
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