Tc09v2_t028970.1

Overview
NameTc09v2_t028970.1
Unique NameTc09v2_t028970.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length828
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
Productalpha carbonic anhydrase 7
NoteAlpha carbonic anhydrase 7
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590909
GenbankXM_007016734.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g028970Tc09v2_g028970Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p028970.1Tc09v2_p028970.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto482129auto482129Theobroma cacaoexon
exon-auto482130auto482130Theobroma cacaoexon
exon-auto482131auto482131Theobroma cacaoexon
exon-auto482132auto482132Theobroma cacaoexon
exon-auto482133auto482133Theobroma cacaoexon
exon-auto482134auto482134Theobroma cacaoexon
exon-auto482135auto482135Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto482136auto482136Theobroma cacaoCDS
CDS-auto482137auto482137Theobroma cacaoCDS
CDS-auto482138auto482138Theobroma cacaoCDS
CDS-auto482139auto482139Theobroma cacaoCDS
CDS-auto482140auto482140Theobroma cacaoCDS
CDS-auto482141auto482141Theobroma cacaoCDS
CDS-auto482142auto482142Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t028970.1 ID=Tc09v2_t028970.1|Name=Tc09v2_t028970.1|organism=Theobroma cacao|type=mRNA|length=828bp
ATGGCAAAGCTACCAACTCAACTCTTGGCTTGCATTTTCTCCATTGTTCT
TGTCTTGCAATATTCATGCCCTGCAACATCTCAAGAAGTCGAGGATGAAA
GTGAGTTTGATTATAATGAAAATAGTCCAAGAGGGCCTGCAAGATGGGGA
GAGATTCATCCAGAATGGAGTGCATGTAGCAATGGATCAATGCAATCTCC
TATTGATATGTCGAATGAGAGAGTTAATATTGTTTCCCATCTCGGGAGGC
TTAAGAGAAGCTACAAGCCATCCAATGCCACTCTAAAAAATAGAGGCCAT
GATATGATGTTGAGATGGGACGGTGATGCAGGAGCCATAGAGATCAATGG
TACTGAGTATGCACTCAAACAGTGCCATTGGCACTCACCTTCCGAGCACA
CCATCAATGGCAGAAGGTATGATTTGGAGGTGCACTTGGTTCATGAAAGT
GCGGACGGCAAGGTTGCTGTGATAGGGATCATGTACAAGATTGGCAGACC
AGATTCTTTCCTCTCATCGTTGCTGGATCATTTAGCAAGCATTACTGATA
TCACAGAAGGAGAGAGCGTGGCGGGTGTGATCGATCCAAGGCACATAAAA
ATTGGCAGTAGGAAGTATTACAGATACATTGGCTCTCTTACTGTTCCTCC
TTGTGATGAAAATGTGGTGTGGAGCATTGTCAGAAAGGTGAGGACTGTGA
CCAGGGAGCAAGTGAGATTGCTTCGTGTGGCCGTTCATGATGCTTCAGAT
ACTAATGCAAGACCACTGCAACCGATAAACAAGCGCTCAGTTCAACTCTT
TAGGCCAGATGATGAAGAAGAGAATTGA
back to top

protein sequence of Tc09v2_p028970.1

>Tc09v2_p028970.1 ID=Tc09v2_p028970.1|Name=Tc09v2_p028970.1|organism=Theobroma cacao|type=polypeptide|length=276bp
MAKLPTQLLACIFSIVLVLQYSCPATSQEVEDESEFDYNENSPRGPARWG
EIHPEWSACSNGSMQSPIDMSNERVNIVSHLGRLKRSYKPSNATLKNRGH
DMMLRWDGDAGAIEINGTEYALKQCHWHSPSEHTINGRRYDLEVHLVHES
ADGKVAVIGIMYKIGRPDSFLSSLLDHLASITDITEGESVAGVIDPRHIK
IGSRKYYRYIGSLTVPPCDENVVWSIVRKVRTVTREQVRLLRVAVHDASD
TNARPLQPINKRSVQLFRPDDEEEN*
back to top