Tc09v2_t026490.1

Overview
NameTc09v2_t026490.1
Unique NameTc09v2_t026490.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length819
Properties
Property NameValue
NoteTropinone reductase homolog At5g06060
Model evidenceSupporting evidence includes similarity to: 1 EST, 78 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
Producttropinone reductase homolog At5g06060
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590628
GenbankXM_018128501.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g026490Tc09v2_g026490Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p026490.1Tc09v2_p026490.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto476392auto476392Theobroma cacaoexon
exon-auto476393auto476393Theobroma cacaoexon
exon-auto476394auto476394Theobroma cacaoexon
exon-auto476395auto476395Theobroma cacaoexon
exon-auto476396auto476396Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto476397auto476397Theobroma cacaoCDS
CDS-auto476398auto476398Theobroma cacaoCDS
CDS-auto476399auto476399Theobroma cacaoCDS
CDS-auto476400auto476400Theobroma cacaoCDS
CDS-auto476401auto476401Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t026490.1 ID=Tc09v2_t026490.1|Name=Tc09v2_t026490.1|organism=Theobroma cacao|type=mRNA|length=819bp
ATGGCAAGGGATGGAACTTCAAGCTGTAGAGACAGCCAATGGTCTCTCAA
AGGAGCAACTGCTCTTGTTACTGGTGGAACAAAAGGAATTGGGCATGCTG
TTGTGGAAGAGTTGACAGCGCTAGGGGCAACAGTTTATACGTGCTCGCGC
AACGAAGATCAGCTGAATGAATGCTTGAAAGAATGGAGGACGAAAGGTTT
ACAAGTTGTTGGTTCAGTCTGTGATGTAGCCTCTCCAGCTGAAAGGGAAA
GGCTGATGAACAAAGTTTCCTCTCTCTTTACTGGGAAACTCAACATCCTT
ATAAACAATGTGGGGACGAACACTTGGAAACCGACCATGGATTACACAGC
TGAAGAACTGTCAACTATGATGAGTACCAATTTTGAATCTGCTTTCCATT
TCTGCCAACTTGCTTATCCCCTTCTCAAAGCATCAGGAGCTGGATGCATT
GTTTTTGTTTCTTCTGTTGCTGGTGTGCTCTCGCTCAATATTGGATCTAT
CTATGGAGCAACTAAAGGAGCAATGAATCAGCTGACTATGAATTTGGCAT
GTGAGTGGGCAAAAGACAATATCAGGAGCAATTGTGTTGCACCTTATTTC
ATTAGAACCCCACTTGTTGAACCAATTCTCAGTAGCAAAGAATTTCTGGC
AGCTCTGAACTCTCGAACCCCTCTCGGTCGCCCTGGACAGCCCAAAGAGG
TTGCCCATTTGGTAGCATTCCTATGCCTTCCAGCAGCCTCCTACATAACT
GGGCAAATTATTTGTGTTGATGGTGGGGTGACAGCAAATGGGTTCTTCTT
CCCAAGAGCAAGACTTTGA
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protein sequence of Tc09v2_p026490.1

>Tc09v2_p026490.1 ID=Tc09v2_p026490.1|Name=Tc09v2_p026490.1|organism=Theobroma cacao|type=polypeptide|length=273bp
MARDGTSSCRDSQWSLKGATALVTGGTKGIGHAVVEELTALGATVYTCSR
NEDQLNECLKEWRTKGLQVVGSVCDVASPAERERLMNKVSSLFTGKLNIL
INNVGTNTWKPTMDYTAEELSTMMSTNFESAFHFCQLAYPLLKASGAGCI
VFVSSVAGVLSLNIGSIYGATKGAMNQLTMNLACEWAKDNIRSNCVAPYF
IRTPLVEPILSSKEFLAALNSRTPLGRPGQPKEVAHLVAFLCLPAASYIT
GQIICVDGGVTANGFFFPRARL*
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