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Properties
Property Name | Value |
Note | DExH-box ATP-dependent RNA helicase DExH11 |
Model evidence | Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns |
Product | DExH-box ATP-dependent RNA helicase DExH11, transcript variant X3 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc09v2_t025740.4 ID=Tc09v2_t025740.4|Name=Tc09v2_t025740.4|organism=Theobroma cacao|type=mRNA|length=4026bp ATGAAACCGATCCAAGCAGCAAACGGATTCAGTTTCCGAGTCGGATTCTC CGGCCACAGCGGCCACCTCAGAGTCGAGCCTCTCTACACCGAGGAGCGCG ATAACCCTATTAAAACTCTCCCCGACTTTGTTCTCCCACCTGCATTTCCC AGGGAAACACCGGAATCGATTAAGGAACATATAAAGGAGAAATATCTTTT GCCAAGATTGGACGATGAAGCTTTTTCTCCAGAAAAAGCTGGAAGGCAAT GGGATTTTGACTGGTTTGAAAGGGTAAAAATACCATTGGAGCCATCATTG CCAAGAACTGTTATGGTTCCAGTCTGGGAGTTACCCTTCAGACGGTGCAA AGGGGGATCAGTTGAAGGAAAGTGGGAACCTAATTCATTGCAGGTGGATG TATCAGAACTAATAGTTGGGGGTCAAGCTTCTGGTTCTTTTCCACACACG GTTGGTGGTGCTGCCAAGGATTTTGTAAGAGGAAGCATTAATAACCGACC TTTTCGTCCAGGAGGCTTGGAGGATCAATCTGTAGAGAGGATTCTTCCGG ATGGTGCATGTAATGGTGAGTGGGTTAGTGAGGTGCTAAATGGTGGTCCT GTTCAAACAATTCCTCCAGGCTTTAAGCAAGGGTTAAACCTTGGTGATCT TACGGCACATCCTTGCTTATGGAATGTTTACAAGGACCGAATTTCACTCA ATAACACATCAGTTGAAAAGGTGAGTGAGTTGTCTGTACAATTTGACGAC TTGTTCAAGAAAGCTTGGGAAGAGGATGTTACAGAATTTGAGAAAGATGA ATCAGATTCTGTTAAGTCAGAAGCTGAGGCGAACCAGGCTGATGTTCTCA ACAGTCTTGATACTGGATCATCTGCTTTGGATGAAATTTTATCAGTTGAA GCAGAAAGATTAGATGAGAAAAGTGATGGGGGTGGTCAGCAACAAAAGGA GGCTTGGGCTGTTAGTGGAGGTAGTGAAGGGATTGCTGATCACTTTTACG AACTAGTTCCTGACATGGCAATTGAATATCCTTTTGAATTGGATACATTC CAGAAGGAGGCTATTTATTATTTGGAAAAGGGGGAGTCTGTTTTTGTGGC GGCTCATACATCTGCTGGAAAAACAGTTGTTGCAGAATATGCATTTGCTT TGGCGTCAAAACATTGCACTAGAGCTGTGTATACAGCTCCAATTAAAACA ATCAGCAATCAGAAGTATAGAGATTTCTGTGGGAAATTTGATGTTGGTCT TCTTACTGGTGATGTTAGTTTGAGACCTGAGGCTTCTTGTCTCATCATGA CGACTGAAATATTAAGGTCAATGCTTTATCGGGGTGCGGATATTATTCGC GATATTGAATGGGTTATATTTGATGAGGTGCACTACGTGAATGATGTTGA AAGAGGCGTGGTTTGGGAAGAGGTCATAATCATGCTTCCAAAACATATTA ACATCATCCTCCTTTCAGCCACGGTGCCGAATACAATTGAATTTGCTGAT TGGATTGGTCGGACGAAGCAAAAAAAAATTCGTGTCACTGGGACAACAAA AAGACCAGTCCCACTGGAGCATTGCCTGTTTTATTCTGGAGAACTTTACA AAATATGTGAAAGTGAAACTTTTATATCATTGGGACTAAAGGCTGCCAAA GATGCATACAAGAAAAAGAATTCCAATGCAATTAGTGGTGGTACTGCTTC GTATACTGGTTCTTCTGCAGTTCATGATGGGGCTCGAGGTCAGAAACGTG AAATTTCTAACCGAGGGAAACAAAATAAGCATTCTGGTCCACAAAATTTG GGGCACTATTCTGGGACAGGTTGGGGGAATCAAGGCAGTGGAGGTGGCCA GAATAGTTGGGGATCTAGGAGATCAGCATGGTTGATGCTTATTGACAAGC TTTCAAAGCAGTCACTATTACCTGTGGTTATATTTGGTTTCTCAAAGAAC CAATGTGATAAATCAGCTGACAGCATCTCTGGGACTGACCTCACTAGTAG TTCTGAGAAAAGTGAGATCCGTGTTTTTTGTGATAAAGCTTTTTCACGGC TTAAGGGATCTGATCGCAATTTACCTCAGGTTGTCAGAGTTCAGAACCTT CTTTGCAGAGGAATTGGTGTGCATCATGCAGGTTTGCTTCCAATTGTCAA GGAAGTTGTTGAAATGCTCTTCTGTCGAGGTGTGATTAAGGTTTTGTTTT CAACAGAGACATTTGCCATGGGTGTTAATGCTCCAGCCAGAACGGTTGTC TTTGATACATTAAGGAAGTTTGATGGCAAGGAATTTAGACAGTTACTCCC TGGGGAATACACTCAAATGGCAGGTCGTGCTGGCAGAAGAGGACTTGATA AAACTGGTACAGTTATTGTGATGTGCCGTGATGAAATCCCAGAAGAGAGG GATTTGAAACATGTTATAACTGGAACTCCAACTAATCTCGAATCTCAGTT CCGATTGACATACATTATGATCCTACATCTTCTTCGTGTGGAAGAACTGA AGGTGGAGGACATGTTGAAACGGAGTTTTTCTGAATTTCATGCTCAGAAG AAACTTCCAGAGCAGCAACAACGTCTATTGCGAAAGCTTGCACAGCCAAA GAAAACTATAGAATGTATTAAAGGTGAACCTGCAATTGAAGAGTACTATG AGATGCATGCAGAAGCCGAGGAACACTACCGACAGATATCAAATGCTGTC ATGCAGTCTCCTGTTGCCCAACAATTTCTTACTGTTGGGAGAGTGGTTGT GGTGAAATCTCAGTCAGCCCACGACCATTTACTTGGAGTTGTCGTAAAAT CACCTTCTGCCAATAACAAACAATATATTGTGCAAGTTCTTAAACCTGAT GTGCCATTAATGACTCAAACTCCCTCAAGCAGCAGTAACTTGCAAGATAA GAGAAGTGCTGACTTCCAACAAGGTTATGTGCTGCTACCAAAAGCTAAAC GTGGTCTCGAAGAAGACTACCGCTTATCTACTGGTCCACGCAAAGGATCA GGTATCATCAACATAAAACTGCCTCACCATGGTGCTGCTGCAGGAGTGAG TTTTGAGGTCAGAGAAACTGATAATACAGAATTCTTATGCATATGCAATA GCAAGATAAAAGTCGAGCAAGTTGGGATTCTTGAATATGGTAGCGATACT GCTTTCTCTAACGCAGTTCAGCAGCTGTTGAAATTGAAATCTAATGGAAA CAAATATCCTCCAGCCTTAGATCCAATTAAAGATCTCAAATTGAAAGACA TGGATCTTGTTCAAAAATACTACAAGTGGACCCACCTACTGCAAAAAATG TCAGAGAACAAATGCCACGAATGTATTAAGTTGGAGGAGCACATTAAGCT AGCTAGAGAGATTAAGAAGCATAAAGATGAAGTTAATGCTCTTGAATTTC AATTGTCTAATGAAGCGCTCCAACAGATGCCAGAATTTCAGGGCCGGATT GATGTTCTGAAGGAAATTGGTTGTATAGATGAAGACCATGTGGTTCAATT AAAAGGTCGTGTTGCCTGTGAGATGAATTCAGGGGAGGAATTGATATGCA CAGAATGTTTATTTGAGAATCAACTAGATGACCTGGAACCTGAAGAAGCG GTGGCTTTAATGTCGGCCTTCGTCTTTCAGCAGAAGAACACTTCTGAACC TTCTCTTACATCAAAACTCTCTCAGGCCAAAAAAAGATTGTATGACACAG CTATAAAACTTGGTAATCTTCAAGCAGGGTTCAAATTACAAATAACACCT GAGGAGTATGCGAAAGAAAATCTCAAGTTTGGTCTTGTTGAAGTGGTGTA CGAATGGGCAAAGGGAACTCCATTTGCAGAAATTTGTGAGCTCACGGATG TTCCTGAAGGCCTTATAGTGCGGACAATTGTCAGGCTGGACGAGACTTGT CGTGAATTTAAAAGTGCTGCAGCTATAATGGGTAATTCATCACTTTATAA GAAAATGGAATCTGCTTCCAATGCCATAAAGCGTGATATCGTCTTTGCTG CTAGTTTGTACATTACAGGAGTGTGA back to topprotein sequence of Tc09v2_p025740.4 >Tc09v2_p025740.4 ID=Tc09v2_p025740.4|Name=Tc09v2_p025740.4|organism=Theobroma cacao|type=polypeptide|length=1342bp
MKPIQAANGFSFRVGFSGHSGHLRVEPLYTEERDNPIKTLPDFVLPPAFP RETPESIKEHIKEKYLLPRLDDEAFSPEKAGRQWDFDWFERVKIPLEPSL PRTVMVPVWELPFRRCKGGSVEGKWEPNSLQVDVSELIVGGQASGSFPHT VGGAAKDFVRGSINNRPFRPGGLEDQSVERILPDGACNGEWVSEVLNGGP VQTIPPGFKQGLNLGDLTAHPCLWNVYKDRISLNNTSVEKVSELSVQFDD LFKKAWEEDVTEFEKDESDSVKSEAEANQADVLNSLDTGSSALDEILSVE AERLDEKSDGGGQQQKEAWAVSGGSEGIADHFYELVPDMAIEYPFELDTF QKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKT ISNQKYRDFCGKFDVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIR DIEWVIFDEVHYVNDVERGVVWEEVIIMLPKHINIILLSATVPNTIEFAD WIGRTKQKKIRVTGTTKRPVPLEHCLFYSGELYKICESETFISLGLKAAK DAYKKKNSNAISGGTASYTGSSAVHDGARGQKREISNRGKQNKHSGPQNL GHYSGTGWGNQGSGGGQNSWGSRRSAWLMLIDKLSKQSLLPVVIFGFSKN QCDKSADSISGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVVRVQNL LCRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVV FDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVIVMCRDEIPEER DLKHVITGTPTNLESQFRLTYIMILHLLRVEELKVEDMLKRSFSEFHAQK KLPEQQQRLLRKLAQPKKTIECIKGEPAIEEYYEMHAEAEEHYRQISNAV MQSPVAQQFLTVGRVVVVKSQSAHDHLLGVVVKSPSANNKQYIVQVLKPD VPLMTQTPSSSSNLQDKRSADFQQGYVLLPKAKRGLEEDYRLSTGPRKGS GIINIKLPHHGAAAGVSFEVRETDNTEFLCICNSKIKVEQVGILEYGSDT AFSNAVQQLLKLKSNGNKYPPALDPIKDLKLKDMDLVQKYYKWTHLLQKM SENKCHECIKLEEHIKLAREIKKHKDEVNALEFQLSNEALQQMPEFQGRI DVLKEIGCIDEDHVVQLKGRVACEMNSGEELICTECLFENQLDDLEPEEA VALMSAFVFQQKNTSEPSLTSKLSQAKKRLYDTAIKLGNLQAGFKLQITP EEYAKENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETC REFKSAAAIMGNSSLYKKMESASNAIKRDIVFAASLYITGV* back to top
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