Tc09v2_t025320.1

Overview
NameTc09v2_t025320.1
Unique NameTc09v2_t025320.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length954
Properties
Property NameValue
NoteDehydrodolichyl diphosphate synthase 4
Model evidenceSupporting evidence includes similarity to: 1 EST, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productdehydrodolichyl diphosphate synthase 2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590504
GenbankXM_018127172.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g025320Tc09v2_g025320Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p025320.1Tc09v2_p025320.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto474277auto474277Theobroma cacaoexon
exon-auto474278auto474278Theobroma cacaoexon
exon-auto474279auto474279Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto474280auto474280Theobroma cacaoCDS
CDS-auto474281auto474281Theobroma cacaoCDS
CDS-auto474282auto474282Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t025320.1 ID=Tc09v2_t025320.1|Name=Tc09v2_t025320.1|organism=Theobroma cacao|type=mRNA|length=954bp
ATGCTATCCTTGAGCCTCGCTATTCCAACCGTCAACACTTTATCTCCTCC
CAAGCCTAAACCGAAGTCTAGTTTAGTTCAAACCGCCAGTAACCAAACAG
AGATTTTTCCTTCTCGGGTTTTTGTTCCCAACCGTTTTGGTTATAAGCTG
CAAGCAGCTACCACCGACGTAGCGAATGGGAAGATTTCTGTGGCGGGAGA
GTTCTCGGAGGAGGAGGAGGAGCTGCCGGAGGGGCTTAATAAAGAGTTGA
TGCCGAAGCACGTGGCGGTGATCATGGATGGGAATGGGCGGTGGGCTCGC
CAGCGGGGATTACCGACTTCGGCTGGGCATGAAGCTGGTGTAAGGTCGCT
GAGGGAGCTCGTCGAGCTATGTTGTCGGTGGGGAATTCAGGTTCTCACTG
TCTTCGCCTTCTCTTCTGAGAACTGGATTCGGCCTAAGGTGGAGGTTGAC
TTTTTGATGAGTTTGTTTGAAAGAGCGTTGAAGTCAGAGCTGGAGACTTT
CTCTAGGGGAGGCATTCGAATATCCGTGATCGGGGATTCATCAAAGCTTC
CCACATCATTGCAGGAGCTGATCCATGAGGTAGAGGAGACCACAAAAGAC
AACTCCAGACTCCAACTCATTGTAGCAGTCAGCTACAGTGGGAAATACGA
TGTTGTACAAGCATGCAGAAGCATTGCTGAGAAAGCAAAACATGGCAATA
TTCAACTGGAAGACATCAACGAAAGCCTAATCGAGAGAGAATTGGAAACA
AACTGCACTGAGTTTCCCTACCCGGATTTGTTAATTAGAACCAGCGGTGA
ACTAAGAGTCAGTAACTTTTTACTCTGGCAGTTGGCCTACACAGAGCTCT
TCTTCGACCAACAACTCTGGCCTGATTTTGGAAAGGATGAGTTCGTAGAA
GCTTTAACTTCACACCAGCAGAGACAGAGACGCTATGGTGGAAGACATTC
ATAA
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protein sequence of Tc09v2_p025320.1

>Tc09v2_p025320.1 ID=Tc09v2_p025320.1|Name=Tc09v2_p025320.1|organism=Theobroma cacao|type=polypeptide|length=318bp
MLSLSLAIPTVNTLSPPKPKPKSSLVQTASNQTEIFPSRVFVPNRFGYKL
QAATTDVANGKISVAGEFSEEEEELPEGLNKELMPKHVAVIMDGNGRWAR
QRGLPTSAGHEAGVRSLRELVELCCRWGIQVLTVFAFSSENWIRPKVEVD
FLMSLFERALKSELETFSRGGIRISVIGDSSKLPTSLQELIHEVEETTKD
NSRLQLIVAVSYSGKYDVVQACRSIAEKAKHGNIQLEDINESLIERELET
NCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELFFDQQLWPDFGKDEFVE
ALTSHQQRQRRYGGRHS*
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