Tc09v2_t024060.1

Overview
NameTc09v2_t024060.1
Unique NameTc09v2_t024060.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length453
Properties
Property NameValue
NotePutative Histidine-containing phosphotransfer protein 1
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
Producthistidine-containing phosphotransfer protein 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590364
GenbankXM_007015823.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g024060Tc09v2_g024060Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p024060.1Tc09v2_p024060.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto471424auto471424Theobroma cacaoexon
exon-auto471425auto471425Theobroma cacaoexon
exon-auto471426auto471426Theobroma cacaoexon
exon-auto471427auto471427Theobroma cacaoexon
exon-auto471428auto471428Theobroma cacaoexon
exon-auto471429auto471429Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto471430auto471430Theobroma cacaoCDS
CDS-auto471431auto471431Theobroma cacaoCDS
CDS-auto471432auto471432Theobroma cacaoCDS
CDS-auto471433auto471433Theobroma cacaoCDS
CDS-auto471434auto471434Theobroma cacaoCDS
CDS-auto471435auto471435Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t024060.1 ID=Tc09v2_t024060.1|Name=Tc09v2_t024060.1|organism=Theobroma cacao|type=mRNA|length=453bp
ATGGTGGGGACTACTCTTTCCCAAGAGCTCAAAAACTACATCCAGTCCAT
GCATGATCAGGGCGTGCTTGATCATCACTTCGACCATGTGAAGGCGTTGC
AGAACGAAGAAAATCCTCAGTTTGTTATGGAAGTGATCTCCATGTTCTGC
CAGGATGCTGAGATTGGGGTTGCCGAAATCACCAGATTTCTGAATGCACC
CGTTGTGGACTTTGCCAAGGTGATCAACTTTGTTCACCAGCTCAAAGGCA
GCAGCTCAAGTATCGGCGGTCAGAGGATGGCCCTCGCTTGTCGCGAGCTT
CGACAAGCTAGTGAAAACAGGGACAAGGAGAGGTGCCTTGAAATCTTTGA
GAGGATGAAACAGGAGTACAATACTCTGCGGGGATGCCTCAATGCCATAT
CCCAGATGGAGAGAACCATCCTCGAGAATGAGACCAGACGCCGAAACCCA
TAG
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protein sequence of Tc09v2_p024060.1

>Tc09v2_p024060.1 ID=Tc09v2_p024060.1|Name=Tc09v2_p024060.1|organism=Theobroma cacao|type=polypeptide|length=151bp
MVGTTLSQELKNYIQSMHDQGVLDHHFDHVKALQNEENPQFVMEVISMFC
QDAEIGVAEITRFLNAPVVDFAKVINFVHQLKGSSSSIGGQRMALACREL
RQASENRDKERCLEIFERMKQEYNTLRGCLNAISQMERTILENETRRRNP
*
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