Tc09v2_t023970.2

Overview
NameTc09v2_t023970.2
Unique NameTc09v2_t023970.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length423
Properties
Property NameValue
NoteCucumisin protein
Model evidenceSupporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
Producthistidine-containing phosphotransfer protein 2-like, transcript variant X5
Cross References
External references for this mRNA
DatabaseAccession
GeneID108663169
GenbankXM_018126554.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g023970Tc09v2_g023970Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p023970.2Tc09v2_p023970.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto471113auto471113Theobroma cacaoexon
exon-auto471114auto471114Theobroma cacaoexon
exon-auto471115auto471115Theobroma cacaoexon
exon-auto471116auto471116Theobroma cacaoexon
exon-auto471117auto471117Theobroma cacaoexon
exon-auto471118auto471118Theobroma cacaoexon
exon-auto471119auto471119Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto471120auto471120Theobroma cacaoCDS
CDS-auto471121auto471121Theobroma cacaoCDS
CDS-auto471122auto471122Theobroma cacaoCDS
CDS-auto471123auto471123Theobroma cacaoCDS
CDS-auto471124auto471124Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t023970.2 ID=Tc09v2_t023970.2|Name=Tc09v2_t023970.2|organism=Theobroma cacao|type=mRNA|length=423bp
ATGGTTGGAAGGGCTGATCATTTTGTGCAGTTGATCAATACATACTGCCT
CAATGTGGAAACCATTTTATCAAAACTTGAAAGCTACATTGATCTCCCTA
ATGTTGATTTTTCTAACTTGGCTGCTCTGGCTACAGAAATAGAGGAGAGA
AGCTCCTGTATTGGTGCTGAGCATGTGAGACTCACATGCTTGGATCTTAT
GCGGGCTTGTGATCAGATGCAAAAGCAGAACTTCTGTCAGGCCTTGAGTT
GGACAAAGAATGAATTCGCTCATACCCGTAACAAGTTGCAGGTCCTTGTC
CAGTGGTTGTTAAATCTTTCTGCCTTGGCTGCATCGAATGCAGATGGAGC
GGAAGATTATGAGGCTCGAAGCAAAACAGCAAAAATAGAATGCTATCAAG
TAGTATTCTTGAATGTGCAATGA
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protein sequence of Tc09v2_p023970.2

>Tc09v2_p023970.2 ID=Tc09v2_p023970.2|Name=Tc09v2_p023970.2|organism=Theobroma cacao|type=polypeptide|length=141bp
MVGRADHFVQLINTYCLNVETILSKLESYIDLPNVDFSNLAALATEIEER
SSCIGAEHVRLTCLDLMRACDQMQKQNFCQALSWTKNEFAHTRNKLQVLV
QWLLNLSALAASNADGAEDYEARSKTAKIECYQVVFLNVQ*
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