Tc09v2_t023620.1

Overview
NameTc09v2_t023620.1
Unique NameTc09v2_t023620.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length453
Properties
Property NameValue
NoteFerredoxin-3, chloroplastic
Model evidenceSupporting evidence includes similarity to: 25 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productferredoxin, root R-B2, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18590316
GenbankXM_007015754.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g023620Tc09v2_g023620Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p023620.1Tc09v2_p023620.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto470452auto470452Theobroma cacaoexon
exon-auto470453auto470453Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto470454auto470454Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t023620.1 ID=Tc09v2_t023620.1|Name=Tc09v2_t023620.1|organism=Theobroma cacao|type=mRNA|length=453bp
ATGACAACTGTGAGTCTTACCTCCCCTTGTATTGTTAAAGCTGCAATCCC
TAACCGATTTACAAGTGCTATCGTCAAGGCCCCAACAACTCTTGGATCTG
TTAAGAGCATCTCTAAATCTTTTGGCTTGAAATGTTCTTCCAATTACAGA
GCATCAATGGCAGTGTACAAAATTAAGCTTGTTGGTCCAAATGGTGAGGA
ATGTGAGTTTGAAGCCCCTGATGATAAATACATCTTAGATGCTGCTGAGG
AGGCGGGTGTTGACCTGCCCTATTCTTGCAGGGCTGGAGCTTGCTCCACA
TGTGCTGGGAAGATTATTTCAGGCTCAGTGGATCAATCTGACGGTTCCTT
CCTTGATGATAAACAAATGGAGGAGGGATATGTGCTGACTTGTGTTTCAT
ACCCAACCTCGGACTGTGAGATCCACACTCACAAGGAAGCTGATCTCTAC
TAA
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protein sequence of Tc09v2_p023620.1

>Tc09v2_p023620.1 ID=Tc09v2_p023620.1|Name=Tc09v2_p023620.1|organism=Theobroma cacao|type=polypeptide|length=151bp
MTTVSLTSPCIVKAAIPNRFTSAIVKAPTTLGSVKSISKSFGLKCSSNYR
ASMAVYKIKLVGPNGEECEFEAPDDKYILDAAEEAGVDLPYSCRAGACST
CAGKIISGSVDQSDGSFLDDKQMEEGYVLTCVSYPTSDCEIHTHKEADLY
*
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