Tc09v2_t015120.4

Overview
NameTc09v2_t015120.4
Unique NameTc09v2_t015120.4
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length444
Properties
Property NameValue
NoteUncharacterized protein
Productuncharacterized LOC18589274, transcript variant X2
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Cross References
External references for this mRNA
DatabaseAccession
GeneID18589274
GenbankXM_018126988.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g015080Tc09v2_g015080Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p015120.4Tc09v2_p015120.4Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto453067auto453067Theobroma cacaoexon
exon-auto453068auto453068Theobroma cacaoexon
exon-auto453069auto453069Theobroma cacaoexon
exon-auto453070auto453070Theobroma cacaoexon
exon-auto453071auto453071Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto453072auto453072Theobroma cacaoCDS
CDS-auto453073auto453073Theobroma cacaoCDS
CDS-auto453074auto453074Theobroma cacaoCDS
CDS-auto453075auto453075Theobroma cacaoCDS
CDS-auto453076auto453076Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t015120.4 ID=Tc09v2_t015120.4|Name=Tc09v2_t015120.4|organism=Theobroma cacao|type=mRNA|length=444bp
ATGACTCTCGACCTACTACATGATCATAGTTGCTCCTCATATTTTATCAG
CGGCAGGATCCCTTTGTTTGGCAGGCTTAAGGTGATGGTCATCAGATTAC
AGGACTTGTTGCAAGAGGAGCAATGCTTTCTGGTCTTTCACATTGAATGC
AGTTCAATGTATCATACTGCTGCTGAAGTGGGATGCCAGTTTGAGGCAGA
TTTCAATTTTCTGATGGCTACAATATTAAAGTTTAGGGAATTAAAAAGAA
ACAAGGGATGGGGCATTCCGAGAATAGAACTTGGGACCTCTCACACCCAA
AGCGAGAATCAGACCACTAGACCAAATGCCCAATTGTTTATGATTGTTGT
GTTTTTTATGTATTTTTGGTTTTCTCCAATGGTTTCTGTTAATTTCAATG
GACTTGTCCTAAGTGGACCAACTCTTTCTGGTCTTGCACATTGA
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protein sequence of Tc09v2_p015120.4

>Tc09v2_p015120.4 ID=Tc09v2_p015120.4|Name=Tc09v2_p015120.4|organism=Theobroma cacao|type=polypeptide|length=148bp
MTLDLLHDHSCSSYFISGRIPLFGRLKVMVIRLQDLLQEEQCFLVFHIEC
SSMYHTAAEVGCQFEADFNFLMATILKFRELKRNKGWGIPRIELGTSHTQ
SENQTTRPNAQLFMIVVFFMYFWFSPMVSVNFNGLVLSGPTLSGLAH*
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