Tc09v2_t015080.11

Overview
NameTc09v2_t015080.11
Unique NameTc09v2_t015080.11
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length264
Properties
Property NameValue
NoteHypothetical protein
Model evidenceSupporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
Productuncharacterized LOC18589274, transcript variant X14
Cross References
External references for this mRNA
DatabaseAccession
GeneID18589274
GenbankXM_018126996.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g015080Tc09v2_g015080Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p015080.11Tc09v2_p015080.11Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto452952auto452952Theobroma cacaoexon
exon-auto452953auto452953Theobroma cacaoexon
exon-auto452954auto452954Theobroma cacaoexon
exon-auto452955auto452955Theobroma cacaoexon
exon-auto452956auto452956Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto452957auto452957Theobroma cacaoCDS
CDS-auto452958auto452958Theobroma cacaoCDS
CDS-auto452959auto452959Theobroma cacaoCDS
CDS-auto452960auto452960Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t015080.11 ID=Tc09v2_t015080.11|Name=Tc09v2_t015080.11|organism=Theobroma cacao|type=mRNA|length=264bp
ATGACTCTCGACCTACTACATGATCATAGTTGCTCCTCATATTTTATCAG
CGGCAGGATCCCTTTGTTTGGCAGGCTTAAGGTGATGGTCATCAGATTAC
AGGACTTGTTGCAAGAGGAGCAATGCTTTCTGGTCTTTCACATTGAATGC
AGTTCAATGTATCATACTGCTGCTGAAGTGGGATGCCAGTGGGTCTTAAA
AATGCATTCGAACTTTGGGTTTGACCGAAGCTATTTTTTTCTAAGCACAG
TACTTTTGGTTTGA
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protein sequence of Tc09v2_p015080.11

>Tc09v2_p015080.11 ID=Tc09v2_p015080.11|Name=Tc09v2_p015080.11|organism=Theobroma cacao|type=polypeptide|length=88bp
MTLDLLHDHSCSSYFISGRIPLFGRLKVMVIRLQDLLQEEQCFLVFHIEC
SSMYHTAAEVGCQWVLKMHSNFGFDRSYFFLSTVLLV*
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