Tc09v2_t006250.1

Overview
NameTc09v2_t006250.1
Unique NameTc09v2_t006250.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length480
Properties
Property NameValue
NoteAuxin-induced protein 15A
Productauxin-responsive protein SAUR41
Model evidenceSupporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Cross References
External references for this mRNA
DatabaseAccession
GeneID18588225
GenbankXM_007012490.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g006250Tc09v2_g006250Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p006250.1Tc09v2_p006250.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto433679auto433679Theobroma cacaoexon
exon-auto433680auto433680Theobroma cacaoexon
exon-auto433681auto433681Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto433682auto433682Theobroma cacaoCDS
CDS-auto433683auto433683Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t006250.1 ID=Tc09v2_t006250.1|Name=Tc09v2_t006250.1|organism=Theobroma cacao|type=mRNA|length=480bp
ATGGATGACCAAGGTGGAAGCAAGTTGACCGGAATCCGGCAGATTGTTAG
ACTAAAGGAAATCCTTCAAAAGTGGCAAACTGTCACACTAGGCTCAAGGC
CAAATGCCCCCCAGTTGGAAGAAAATCAGGGGGGTGTCTCAGGACCAGTT
AACAAAAGGCTAACAAATGTTATGTGTTGTGATTCTGATGAGGAAAGCTG
CCACAGTCCTGAACCACCGCCTGATGTTCCAAAGGGATATTTGGCAGTTT
ATGTTGGGCCAGAGCTTCGGAGGTTTATCATCCCTACGAGCTATCTCAGC
CATCCTGTCTTCAAGATTTTGCTGGAAAAAGCTGAGGAGGAATTTGGGTA
TAATCACAATGGCGGGCTTACTCTCCCTTGTGAGATTGAGACCTTCAAGT
ATCTATTGAAGTGCATAGAGAACAATCATAAGGGTCACCCTATTGATAGC
TCAGATTCTGAACAGCTGGAGATTCAATAA
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protein sequence of Tc09v2_p006250.1

>Tc09v2_p006250.1 ID=Tc09v2_p006250.1|Name=Tc09v2_p006250.1|organism=Theobroma cacao|type=polypeptide|length=160bp
MDDQGGSKLTGIRQIVRLKEILQKWQTVTLGSRPNAPQLEENQGGVSGPV
NKRLTNVMCCDSDEESCHSPEPPPDVPKGYLAVYVGPELRRFIIPTSYLS
HPVFKILLEKAEEEFGYNHNGGLTLPCEIETFKYLLKCIENNHKGHPIDS
SDSEQLEIQ*
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