Tc09v2_t000200.1

Overview
NameTc09v2_t000200.1
Unique NameTc09v2_t000200.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length969
Properties
Property NameValue
NoteCell division control protein 2 homolog
Model evidenceSupporting evidence includes similarity to: 13 ESTs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productcell division control protein 2 homolog, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18587577
GenbankXM_007011446.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc09v2_g000200Tc09v2_g000200Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc09v2_p000200.1Tc09v2_p000200.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto419619auto419619Theobroma cacaoexon
exon-auto419620auto419620Theobroma cacaoexon
exon-auto419621auto419621Theobroma cacaoexon
exon-auto419622auto419622Theobroma cacaoexon
exon-auto419623auto419623Theobroma cacaoexon
exon-auto419624auto419624Theobroma cacaoexon
exon-auto419625auto419625Theobroma cacaoexon
exon-auto419626auto419626Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto419627auto419627Theobroma cacaoCDS
CDS-auto419628auto419628Theobroma cacaoCDS
CDS-auto419629auto419629Theobroma cacaoCDS
CDS-auto419630auto419630Theobroma cacaoCDS
CDS-auto419631auto419631Theobroma cacaoCDS
CDS-auto419632auto419632Theobroma cacaoCDS
CDS-auto419633auto419633Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc09v2_t000200.1 ID=Tc09v2_t000200.1|Name=Tc09v2_t000200.1|organism=Theobroma cacao|type=mRNA|length=969bp
ATGGACCAGGTTAGTTGTCATTTTAATTTACCTCGTTATTTTGCTGCGTT
ATCTCTGCACCTGAGCTCGTTATGCTTTTTCTCAATCTTCCAGTACGAGA
AAGTTGAGAAGATTGGTGAAGGAACCTATGGCGTTGTCTATAAGGCTCGA
GACCGCATCACCAATGAAACGATCGCTTTAAAGAAGATTCGCTTGGAGCA
GGAAGACGAGGGTGTACCTAGCACCGCAATCAGAGAAATTTCTCTCTTGA
AAGAAATGCAGCATGGAAATATCGTTAGGTTGCAGGATGTAGTGCATAGT
GAGAAGCGTCTATATTTGGTTTTTGAATATCTGGACTTGGATTTGAAGAA
GCACATGGATTCATGCCCAGAATTTGGGAAAGATCCACGGATGATAAAAA
CATTCCTTTATCAAATTCTCCGTGGCATTGCTTATTGTCATTCTCATAGG
GTTCTTCACCGAGATCTAAAACCACAAAATTTGCTGATAGATCGCAGCAC
CAATGCACTAAAGCTTGCTGATTTTGGGTTGGCCCGAGCATTTGGTATTC
CTGTCAGAACATTTACACATGAGGTGGTTACCCTCTGGTACAGAGCACCA
GAAATACTGCTTGGGTCCCGTCATTACTCTACACCTGTTGATGTGTGGTC
AGTGGGCTGTATATTTGCTGAGATGGTGAATCAGCGGCCATTATTTCCTG
GGGATTCTGAGATTGATGAACTGTTCAAGATCTTCAGAATCTTGGGTACT
CCAAATGAGGATATATGGCCTGGAGTGACTTCATTGCCTGATTTTAAGTC
TGCTTTTCCAAAGTGGCCGCCTAAGGATTTGGCAACTGTTGTTCCAAATC
TTGAATCAGCTGGCATTGACCTCCTTTCTAAAATGCTGTGCATGGATCCC
AGCAAAAGAATTACAGCAAGAAGTGCACTTGAGCATGAATACTTCAAGGA
TATTGGGTTTGTACCCTGA
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protein sequence of Tc09v2_p000200.1

>Tc09v2_p000200.1 ID=Tc09v2_p000200.1|Name=Tc09v2_p000200.1|organism=Theobroma cacao|type=polypeptide|length=323bp
MDQVSCHFNLPRYFAALSLHLSSLCFFSIFQYEKVEKIGEGTYGVVYKAR
DRITNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS
EKRLYLVFEYLDLDLKKHMDSCPEFGKDPRMIKTFLYQILRGIAYCHSHR
VLHRDLKPQNLLIDRSTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAP
EILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRILGT
PNEDIWPGVTSLPDFKSAFPKWPPKDLATVVPNLESAGIDLLSKMLCMDP
SKRITARSALEHEYFKDIGFVP*
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