Tc08v2_t014790.1

Overview
NameTc08v2_t014790.1
Unique NameTc08v2_t014790.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length930
Properties
Property NameValue
NoteBasic-leucine zipper transcription factor family protein, putative
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
ProductG-box-binding factor 4
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592635
GenbankXM_007019457.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g014790Tc08v2_g014790Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p014790.1Tc08v2_p014790.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto415030auto415030Theobroma cacaoexon
exon-auto415031auto415031Theobroma cacaoexon
exon-auto415032auto415032Theobroma cacaoexon
exon-auto415033auto415033Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto415034auto415034Theobroma cacaoCDS
CDS-auto415035auto415035Theobroma cacaoCDS
CDS-auto415036auto415036Theobroma cacaoCDS
CDS-auto415037auto415037Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t014790.1 ID=Tc08v2_t014790.1|Name=Tc08v2_t014790.1|organism=Theobroma cacao|type=mRNA|length=930bp
ATGGCGTCGTCTAAAGTAATGCCGACTTCAAATTCGCGAAATTCGGATCT
CTCCCGACGCTCTGCTTCTTCTTCTTCCTCTACAAAGCCTCAATCTTTCT
CTGATCAAAGCAACATCAACAACAGTAACACCAACAGATTAAGCTCGACA
ATGACGGTCGACGGCATCCTTCGAAACGTTTACTCAGCCGCTCCCACGAC
GGAGACGACGCTGGTTGACGCTTCCATAACTCTAATCGATACTCCGACAC
CGACCACCGCCGGCGGTAATTCCGAAGTTTCTCAAGGTCAAACCGTCGCG
GATTGTAGTAACAATGTGGCGAAAAGTGTAGACGAGGTTTGGAGGGAAAT
AGTGTCCGGCGAGAGGAAAGAGATCACGATGAAAGAAGAAGCGCCCGACG
AGATGATGACGTTGGAGGATTTCTTGGCGAAGGCTGGGGCAGTGGAGGAC
GCGGCGGCTGCTGCGACGGCGGAGGTTAAGGTGCAGCAGGATAGAATGAG
TGGTGGTGTCTACGCTTATGATCCGGTGGGAGGGAGTCCGTTTCAAATGC
TGGATAAGATGGAGGGATCAATTGTTGGATTGAACGGGATGGAAGTCATT
GGAAGTGGAGGAGGTGCTGGTGGTGGAGGGAGAGGGAAGAGAGGAAGAGG
GGTTTTGATGGAGCCGCTGGACAAGGCGGCACAGCAGCGGCAGAGGAGGA
TGATTAAGAACAGGGAATCTGCCGCTCGGTCTAGGGAAAGGAAGCAGGCA
TACCAAGTTGAATTGGAGTCATTAGCAGTGAAACTAGAAGAGGAGAACGA
GCAATTACTGAAAGAGAAGGCTGAGAGGACTAAGGAAAGGTTTAAGCAGC
TCATGGAGAAGGTGGTTCCAGTTGTGGAGCAGCGAAGACCACCACGTGTC
CTTCGTAGAGTTCGTTCTTTGCAATGGTAG
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protein sequence of Tc08v2_p014790.1

>Tc08v2_p014790.1 ID=Tc08v2_p014790.1|Name=Tc08v2_p014790.1|organism=Theobroma cacao|type=polypeptide|length=310bp
MASSKVMPTSNSRNSDLSRRSASSSSSTKPQSFSDQSNINNSNTNRLSST
MTVDGILRNVYSAAPTTETTLVDASITLIDTPTPTTAGGNSEVSQGQTVA
DCSNNVAKSVDEVWREIVSGERKEITMKEEAPDEMMTLEDFLAKAGAVED
AAAAATAEVKVQQDRMSGGVYAYDPVGGSPFQMLDKMEGSIVGLNGMEVI
GSGGGAGGGGRGKRGRGVLMEPLDKAAQQRQRRMIKNRESAARSRERKQA
YQVELESLAVKLEEENEQLLKEKAERTKERFKQLMEKVVPVVEQRRPPRV
LRRVRSLQW*
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