Tc08v2_t010810.1

Overview
NameTc08v2_t010810.1
Unique NameTc08v2_t010810.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length756
Properties
Property NameValue
NoteTwo-component response regulator ARR9 isoform 1
Model evidenceSupporting evidence includes similarity to: 6 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
Producttwo-component response regulator ORR9, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18592359
GenbankXM_018126384.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g010810Tc08v2_g010810Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p010810.1Tc08v2_p010810.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto406803auto406803Theobroma cacaoexon
exon-auto406804auto406804Theobroma cacaoexon
exon-auto406805auto406805Theobroma cacaoexon
exon-auto406806auto406806Theobroma cacaoexon
exon-auto406807auto406807Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto406808auto406808Theobroma cacaoCDS
CDS-auto406809auto406809Theobroma cacaoCDS
CDS-auto406810auto406810Theobroma cacaoCDS
CDS-auto406811auto406811Theobroma cacaoCDS
CDS-auto406812auto406812Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t010810.1 ID=Tc08v2_t010810.1|Name=Tc08v2_t010810.1|organism=Theobroma cacao|type=mRNA|length=756bp
ATGGAGTTGAAATCAGACAACATTCAAGACAGACCCGAACAGCAACAACA
GCAAATGCAGCAGCAGCAGCAGGAACAACAAGAACAACAGCACTTTCATG
TGCTGGCAGTTGATGACAGTGTTATTGACAGAAAGTTATTGGAGAAGCTC
CTCAAAGTTTCTTCATACCAAGTGACTTGTGTTGACTCTGGGGATAAAGC
TTTGGAATATCTGGGACTGCTTAATAACTTGGACTGTCACTCAACAACTT
CTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTCTTGTTCCCAGTCT
TCGCAACAAGAGGGACTTAAAGTCAACTTAATCATGACAGACTTCTGTAT
GCCCGGAATGAGCGGCTATGATTTACTCAAACGTGTCAAGGGATCTTCTT
GGAAAGATGTACCAGTCGTGGTCATGTCATCAGAAAATGTACCTTCAAGA
ATTAGCATGTGCTTGGAAGGAGGAGCAGAAGAATTCCTGTTAAAGCCTCT
TCAATTATCAGACTTGGACAAAATTCAAGCTTACCTTGTGAAATCCCTTG
ATCATTCCTGTACAAACATGGACAAAGACTTGATCGGTGATAACAATGAC
AACGATGACAACAGCAATAACAACTACAGCGAGGACAGCAATAACGACAA
TGGCAATAGTAACAATAGCAACAATAATTTTAGCAAGAGGAAGGCAATAT
CTTCTGAAGCTACAGAGAGAAGACCAAAAATGAAAGGAGTAGCAGTAATA
GTATGA
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protein sequence of Tc08v2_p010810.1

>Tc08v2_p010810.1 ID=Tc08v2_p010810.1|Name=Tc08v2_p010810.1|organism=Theobroma cacao|type=polypeptide|length=252bp
MELKSDNIQDRPEQQQQQMQQQQQEQQEQQHFHVLAVDDSVIDRKLLEKL
LKVSSYQVTCVDSGDKALEYLGLLNNLDCHSTTSSSSSSSSSSSSSCSQS
SQQEGLKVNLIMTDFCMPGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSR
ISMCLEGGAEEFLLKPLQLSDLDKIQAYLVKSLDHSCTNMDKDLIGDNND
NDDNSNNNYSEDSNNDNGNSNNSNNNFSKRKAISSEATERRPKMKGVAVI
V*
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