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Properties
Property Name | Value |
Note | Set domain protein, putative isoform 1 |
Model evidence | Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns |
Product | histone-lysine N-methyltransferase ATXR7, transcript variant X4 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc08v2_t008160.4 ID=Tc08v2_t008160.4|Name=Tc08v2_t008160.4|organism=Theobroma cacao|type=mRNA|length=3627bp ATGGTTTCCTCAACATCCCCCTTTGACGAATATGATCACGTTCACGATTA CCCTTTCTTTTCCAGAAAGCGGCTTAAAGTTTCAGATCGCAGATCAAATA TCTATACAGGCCTCTCTCCTGATTCTGCATCTTCGATTTGCGGTGATGAA CGATCCGCAACGGAGATGAGTTGCCAATCTAATGGCAATAGCAGTGGTGT TCCTCAATCTTGTAATGACGGTGGAGGTTCATGCCAAGACAAGAGTTACT CCAGCTATGCACCGTCTTCTTTTGCGAGTGGATGGATGTATGTAAACGAA CATGGACAGATGTGTGGCCCTTACATCCAGCAGCAATTATACGAGGGTTT ATCTACTGGTTTCCTGCCTGATGAGCTCCCTGTTTATCCTGTAGTCAATG GGACTGTGAGTAATCCTGTTCCCTTAAAATACTTCAGGCAGTTCCCTGGT CATGTCGCAACTGGATTTGTGTATCTCAGTTCAACCACAGCTTCCAATTG TTTGAAGTCTTCCCATACAAATTTCCAGCACACCCTTTCCCAATCACAAA TTAACCGCAATGGTTTTGATGCATCCAATGACCTCATTTCAAGCTCTCTT TTGCAGTCAGGTGAAGATGCATGTTGGTTGTATGAGGATGATAAGAGTAC GAAACATGGGCCTCATTCCCTTTTACAACTATATTCTTGGCATCGCTATG GGTATCTTGCAGATTCTGTTATGATACATCATGCTGAAAACAGGTTTCGC CCCATTAAGTTGCTGTCTGTTTTAAATGCTTGGAAAGGTAGTCAAGCTTA TGCTGCTGAAAATGAACGGGACTTATCAGTGAACTTCATATCTGATATTT CTGAAGAAGTTTCTTCTCAGCTCCATTCTGGGATTATGAAAGCAGCTCGT AGAGTTGTGCTAGATGAAATAATCAGCAATATGATCTCAGAGTTTGTTAC TGCAAAAAAATCTCAGAGACATCTAATGGTTGAATCATTCAACCAGGATG CTAAAAGGTTTCCTGATGGAAAAAGGATTGAAAATGCCCCCGAAATAAAA ATGCAGTGTATTCCCATGTTTGAGACGGCAGCCTCCCACAATGTATCTGA CCAGCCATGCATTCAAGAATCTACATGTTCTCCTGCAAGTATAAAATCTG TTGGAAGCATTGAAAATTTTTGGGGTTCTTATACAGTTGTTTGTAAGATG CTTTTTGACTACTGCATGCAAGTTATGTGGAATGCTGTCTTTTATGACAG TATAGCCGAGTATTCGTCTTCCTGGAGAAGGGGAAAACTTTGGTTTGGTC ACCCTAATGTTATGCTGTCTGCTACTGACTCCAGGGATCATGGCAACGAG ACTGAAAAAGTAACAGATAAACCTCTCTTATCTGGGATGGAATTGATTGC TCATGACGTTGATTGTCCACCTGGTTTTGAGCTGGCAACAGTTGCTGGAG TTGATTCTGCAGAAAAGTCATCTAAATCTTCATATGTTGTGCAGCAAATT TTATCCAAACAGAAAACCCGATTGTGCAATAATGGCCTGTATGATGACAT GGAATGCATCCTTGAAGGTGTTGAAAATGAGCTCCATTTATCTGTGAAGG TGTTTATGGCCAAGTATGTTGACAATTTTGTTAAAAGTGAAGCAAGAAGA GTGATTGGTTTGGAAAATGATGACAAATCGAAGGAAAATCTTGATGATGA AGAAGCAGAGAAATCAGTTAATTTTTCAATAGATGATGAATTGAAAGAAT TACAAAAGTTGCAAGATGCTGTTGGATCTTCCAGTCAATGCCATCTTGCT TTAGAGTTTGATACTTTAGACATTTGTGGAGAGAAAAGGGTCAGTTTAAG CAGAATGTCTGATTTATCTGGCAATCTACAGAATCCATTACAATCTTGGA CACCCATTTGTCAGTCTGTGTCTGAAAATTTGTATGTTACAAGGCAGGAA ACTTTCATGGCAGGTGCATTTAAGAGTTTGTTTTCACATTTAGGGGACGT AATTGATGAACTAGAAGTTGATGAGCCACCACCTCCTGGACTTGAGGGTA ATGCTGGGACGCTTGTTCCATCACACCTTTGTAAGTTTCGACCTTCAAGG TCAGATGAGCGTAGCCCTAAGATTGGAGAATATGTTGCCGTGGCAATGTG TCGGCAGAAGCTCCATGAGGATGTACTAAGAGAGTGGAAATCATCTTTTA TTGATGCTACTCTTTATCAGTTTCTTACATCATGGCGTAGTTTGAAGAAA CGCTGTAAGGCTGATAGCAAAGAGGAAAGGGCATTTAGTGTAGGAAGGGA AATTCTCGCTGATTCTTCTGCCATAGGAGATAAGCTCAGGGAGAGGTCAA AGAAGTCTCAGAGTTCAGGCTCCTCAGAAGTATCTTTAGTTACTGGTAAA TATACATATTACCGCAAGAAAAAGTTGGTTCGTAAGAAGATAGGATCTAC TCAGTCCACTATTGTCAATGGGTCACAGAATCATCCTGTTGAAAGGCCTC GGAAAAAAGAGGCTTCCAGAAATTTGTTGGATCATGCAGATCCAGAACCA ACTGCGGCCACTTCTAAAAAGAGTGCAGGTGGTCGCAAAAAAACCAAGGT TACCCTTGCTGTTCAAAAAAATTTGGTCGGAGAAGGTGCGGTTCAAGTCT CCAGGGAGAGAGCATCAACCTCTCAGAATTGTGATGTTAAGAAGGTTGTT GGCAGGACTAACCATATTGTTGGAAGTGAAGTAGAGCTCACTAATGATTC CCACAAGAAGACACTAAAAGCTCCCAAGGTATCAAGGGTAAAAAGGAAGC AATTAGATAATGATGAGCCTCCATTGCTTCCAACCAAGGTACAGAAAGTG GCAAATTCTGCTAGCAAGCATCCTTCTTCTAGAGGGAATGCAGATCGAAA TACCCATTCAATTAGATCCAGGACAGCAAATTCCTGTCCCAGATCTGATG GATGTGCGCGTTCTTCAATTAATGGCTGGGAGTGGCATAAATGGTCACTC AATGCAAGTCCTGCTGAAAGAGCTCGTGTTAGAGGAATTCAGTGTACACA CATGAAATATTCAGGCTCTGAGGTTAATAATATGATGCAGTTGTCAAACG GTAAAGGTCTTTCTGCAAGAACAAACAGAGTGAAGCTGCGCAATCTTCTT GCTGCTGCAGAGGGTGCTGATCTCTTAAAAGCAACTCAGTTGAAGGCAAG GAAAAAGCGTCTACGTTTTCAGCGAAGCAAGATTCACGATTGGGGTCTCG TTGCGCTTGAGCCAATTGAGGCTGAGGATTTTGTCATTGAATATGTTGGA GAGTTGATTCGTCCCCGGATATCTGATATACGTGAACACTATTATGAGAA GATGGGAATTGGTAGCAGTTATCTGTTTAGGCTTGATGATGGATACGTGG TTGATGCTACAAAGCGTGGTGGGATTGCTAGATTTATAAATCATTCTTGT GAGCCTAACTGTTACACAAAAGTTATTAGTGTTGAGGGCCAGAAGAAGAT TTTCATCTATGCAAAACGGCACATAGCAGCTGGTGAAGAAATTACTTACA ACTACAAGTTCCCTTTGGAGGAGAAAAAAATTCCTTGCAACTGTGGTTCA AAGAAGTGTCGTGGATCTTTAAACTAG back to topprotein sequence of Tc08v2_p008160.4 >Tc08v2_p008160.4 ID=Tc08v2_p008160.4|Name=Tc08v2_p008160.4|organism=Theobroma cacao|type=polypeptide|length=1209bp
MVSSTSPFDEYDHVHDYPFFSRKRLKVSDRRSNIYTGLSPDSASSICGDE RSATEMSCQSNGNSSGVPQSCNDGGGSCQDKSYSSYAPSSFASGWMYVNE HGQMCGPYIQQQLYEGLSTGFLPDELPVYPVVNGTVSNPVPLKYFRQFPG HVATGFVYLSSTTASNCLKSSHTNFQHTLSQSQINRNGFDASNDLISSSL LQSGEDACWLYEDDKSTKHGPHSLLQLYSWHRYGYLADSVMIHHAENRFR PIKLLSVLNAWKGSQAYAAENERDLSVNFISDISEEVSSQLHSGIMKAAR RVVLDEIISNMISEFVTAKKSQRHLMVESFNQDAKRFPDGKRIENAPEIK MQCIPMFETAASHNVSDQPCIQESTCSPASIKSVGSIENFWGSYTVVCKM LFDYCMQVMWNAVFYDSIAEYSSSWRRGKLWFGHPNVMLSATDSRDHGNE TEKVTDKPLLSGMELIAHDVDCPPGFELATVAGVDSAEKSSKSSYVVQQI LSKQKTRLCNNGLYDDMECILEGVENELHLSVKVFMAKYVDNFVKSEARR VIGLENDDKSKENLDDEEAEKSVNFSIDDELKELQKLQDAVGSSSQCHLA LEFDTLDICGEKRVSLSRMSDLSGNLQNPLQSWTPICQSVSENLYVTRQE TFMAGAFKSLFSHLGDVIDELEVDEPPPPGLEGNAGTLVPSHLCKFRPSR SDERSPKIGEYVAVAMCRQKLHEDVLREWKSSFIDATLYQFLTSWRSLKK RCKADSKEERAFSVGREILADSSAIGDKLRERSKKSQSSGSSEVSLVTGK YTYYRKKKLVRKKIGSTQSTIVNGSQNHPVERPRKKEASRNLLDHADPEP TAATSKKSAGGRKKTKVTLAVQKNLVGEGAVQVSRERASTSQNCDVKKVV GRTNHIVGSEVELTNDSHKKTLKAPKVSRVKRKQLDNDEPPLLPTKVQKV ANSASKHPSSRGNADRNTHSIRSRTANSCPRSDGCARSSINGWEWHKWSL NASPAERARVRGIQCTHMKYSGSEVNNMMQLSNGKGLSARTNRVKLRNLL AAAEGADLLKATQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYVG ELIRPRISDIREHYYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSC EPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEEKKIPCNCGS KKCRGSLN* back to top
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