Tc08v2_t004850.1

Overview
NameTc08v2_t004850.1
Unique NameTc08v2_t004850.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1554
Properties
Property NameValue
NoteProbable serine/threonine-protein kinase At4g35230
Model evidenceSupporting evidence includes similarity to: 9 ESTs, 69 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productprobable serine/threonine-protein kinase At4g35230
Cross References
External references for this mRNA
DatabaseAccession
GeneID18591677
GenbankXM_007017927.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g004850Tc08v2_g004850Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p004850.1Tc08v2_p004850.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto392302auto392302Theobroma cacaoexon
exon-auto392303auto392303Theobroma cacaoexon
exon-auto392304auto392304Theobroma cacaoexon
exon-auto392305auto392305Theobroma cacaoexon
exon-auto392306auto392306Theobroma cacaoexon
exon-auto392307auto392307Theobroma cacaoexon
exon-auto392308auto392308Theobroma cacaoexon
exon-auto392309auto392309Theobroma cacaoexon
exon-auto392310auto392310Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto392311auto392311Theobroma cacaoCDS
CDS-auto392312auto392312Theobroma cacaoCDS
CDS-auto392313auto392313Theobroma cacaoCDS
CDS-auto392314auto392314Theobroma cacaoCDS
CDS-auto392315auto392315Theobroma cacaoCDS
CDS-auto392316auto392316Theobroma cacaoCDS
CDS-auto392317auto392317Theobroma cacaoCDS
CDS-auto392318auto392318Theobroma cacaoCDS
CDS-auto392319auto392319Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t004850.1 ID=Tc08v2_t004850.1|Name=Tc08v2_t004850.1|organism=Theobroma cacao|type=mRNA|length=1554bp
ATGGGCTGCTGCGAATCGTCCTTTCTGAAAGGACGCGGCTCACGCCGCAA
AACCAATTACAACCACCACCACAACAGCAGCAGCAACAACAACCGTCACG
CTCAGGCCAATAACGGCCCTCCCCAACCGTCCAACGGAACGGATTCTGTT
GGCGGTGGGGCAGGGGGCGTACCGGATTTCGCGGAGTTCTCTCTCACCGA
GCTTAAGGCTGCCACCAACAACTTCAGCTCCGATTTCATCGTATCGGAAA
GCGGCGAAAAGGCCCCCAATGTGGTCTACAAAGGTCGCCTCCAAAACGAC
AACAATCGCCGTTGGATCGCCATAAAGAAATTTACCAAATTAGCCTGGCC
CGATCCAAAACAATTCGCCGAGGAAGCCTGGGGTGTTGGAAAGCTGAGAC
ATAAGAGAGTGGCGAATTTGATTGGGTATTGCTGCGATGGCGACGAGAGA
CTGCTTGTTGCCGAGTACATGCCCAACGATACCCTTGCAAAGCATTTATT
TCACTGGGAGAACCAGACTATCGAGTGGGCCATGCGGTTGAGAGTTGCTT
TATATATAGCTGAAGCATTAGATTATTGTAGTAGTGAAGGTCGTCTGTTG
TATCATGATTTGAATGCATATAGGGTTCTCTTTGATGAGAATGGTGATCC
TCGACTTTCATGTTTTGGCTTGATGAAGAACAGTAGGGATGGGAAAAGTT
ATAGTACCAATCTTGCATATACACCTCCTGAGTATCTAAGAAATGGAAGG
GTTACTCCTGAAAGTGTTATATTCAGCTTCGGAACTGTCCTTTTGGATCT
TCTCAGTGGAAAGCATATTCCTCCAAGTCACGCTCTTGATATGATACGGG
GCAAAAACATTCTTCTCTTAATGGATTCGCATCTAGAGGGAAACTTTTCA
ACTGAAGAGGCAACAGTGGTCTTTGATCTGGCTTCACGATGTTTGCAATA
TGAACCAAGGGAGCGGCCAAACACCAAAGATCTTGTTACTACACTTGCCC
CATTGCAAAATAAACCTGATGTTCCGTCTTATGTGATGTTGGGAATTCCC
AAGCATGAGGAGGGGCCTCCTACTCCTCAGCACCCTCTATCTCCCATGGG
AGATGCCTGCTCACGGATGGATCTCACTGCTATTCATCAAATTTTGGTAA
TGACACATTACAAAGATGATGAAGGAACAAATGAGCTATCCTTTCAAGAG
TGGACTCAACAAATGAGAGATATGTTGGAGGCAAGAAAGCGTGGAGATGT
AGCATTTCGTGACAAAGATTTTAAGACTGCAATAGAGTGTTATTCTCAGT
TCATAGATGTTGGAACCATGGTTTCTCCAACTGTGTATGCACGAAGAAGT
CTTTGTCATCTTCTCTGTGATCAACCAGATGCCGCCCTCCGAGATGCAAT
GCAAGCACAATGCGTCTACCCTGACTGGTCGACAGCATTTTACATGCAGG
CTGTTGCCCTTGCCAAGCTAGACATGCACAAGGATGCAACTGACATGTTA
AATGAAGCTGCTGCACTAGAAGAAAAAAAGCAACGGGGTGGGAAAGCATC
TTGA
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protein sequence of Tc08v2_p004850.1

>Tc08v2_p004850.1 ID=Tc08v2_p004850.1|Name=Tc08v2_p004850.1|organism=Theobroma cacao|type=polypeptide|length=518bp
MGCCESSFLKGRGSRRKTNYNHHHNSSSNNNRHAQANNGPPQPSNGTDSV
GGGAGGVPDFAEFSLTELKAATNNFSSDFIVSESGEKAPNVVYKGRLQND
NNRRWIAIKKFTKLAWPDPKQFAEEAWGVGKLRHKRVANLIGYCCDGDER
LLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRLL
YHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGR
VTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILLLMDSHLEGNFS
TEEATVVFDLASRCLQYEPRERPNTKDLVTTLAPLQNKPDVPSYVMLGIP
KHEEGPPTPQHPLSPMGDACSRMDLTAIHQILVMTHYKDDEGTNELSFQE
WTQQMRDMLEARKRGDVAFRDKDFKTAIECYSQFIDVGTMVSPTVYARRS
LCHLLCDQPDAALRDAMQAQCVYPDWSTAFYMQAVALAKLDMHKDATDML
NEAAALEEKKQRGGKAS*
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