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Properties
Property Name | Value |
Model evidence | Supporting evidence includes similarity to: 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns |
Product | 5'-3' exoribonuclease 3, transcript variant X2 |
Note | 5'-3' exoribonuclease 3 |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Tc08v2_t003520.2 ID=Tc08v2_t003520.2|Name=Tc08v2_t003520.2|organism=Theobroma cacao|type=mRNA|length=3324bp ATGGGAGTGCCAGCGTTCTACAGATGGTTAGCGGAGAAGTATCCGCTTGT TATAATGGACGTTATCGAGGAAGAACCGGTGGTTATCGACGGCGTCTCCA TTCCGGTTGATACGAGTAAACCTAACCCCAACAAACTCGAATTCGATAAT CTTTATCTCGACATGAACGGGATCATTCATCCTTGTTTCCACCCCGAAGA CAGACCTTCGCCGACAACTTTTGATGAAGTATTTCAGTGCATGTTTGATT ACATTGATAGATTGTTTGTTATGGTCCGCCCTCGGAAGCTTTTATTTATG GCCATTGATGGCGTTGCCCCTCGGGCCAAAATGAACCAACAGCGCTCTAG GCGATTTAGAGCAGCAAAAGATGCTGCAGAGGCGGCAGCTGAAGAAGCAA GGCTACGAGAGGAGTTTGAGAGGGAGGGCAGAAGGCTTCCTCCTAAAGAG GAATCACAACTTTTTGATTCAAATGTTATAACACCTGGCACTCCATTTAT GGCTGTTTTGTCAATTGCTTTGCAGTACTATATCCACCTTAGGTTAAATT ATGACCCTGGATGGAAAACAGTCAAGGTTATTCTTTCTGATGCAAATGTT CCTGGTGAAGGAGAACATAAAATTATGTCATATATTCGGCTCCAAAGGAA CCTTCCTGGTTTTAATCCAAATACACGCCATTGCCTGTATGGTTTGGATG CTGATTTAATTATGTTGGCCTTGGCCACTCATGAAGTTCATTTTTCAATC CTCCGAGAGGTTGTCTTTACCCCTGGACAAGATAAATGCTTCGTGTGTGG TCAGATGGGCCATGTAGCAGCAGATTGTGAAGGAAAGGCAAAGCGAAAGG CTGGAGAATTTGATGAGAAAGGTGATGGAAAAGCTGTGGCCAGAAAGCCT TACCAGTTTCTGAACATATGGACACTTAGGGAGTATCTGGAATATGAGAT GAGAATCCCCAACCTTCCTTTTGAAATGGACTTGGAGCGTGTTGTGGATG ATTTTATATTCATGTGCTTCTTTGTTGGCAATGATTTTTTACCTCATATG CCCACACTAGAGATTCGTGAGGGTGCAATCAACTTGCTAATGGCTGCATA CAAGAAGGAATTGAGGTCATTGGGTGGTTATTTGACCAATGGAAGCAAGC CAAATTTGAGCAGGGTAGAGCATTTTATCCAGGCTGTGGGATCCTATGAA GATAAAATATTCCAGAAAAGAGCACGATTGCATCAGCGTCAAGCAGAAAG AATCAAGCGTGAAAAAGCACAAGCTAGAAGAGGAGATGATGTGGAGCCTC AAATTCAACCTGATTCTCTGGTTCCAGTTGCTAGATTTCACGGTTCCCGT CTTGCCTCAGGCCCTTCACCTGCACCATTTCAGCAAACAATGGAGTCTAA TGGTAATGGATCCTCTGGTCAGCCGCACAAAGTGCGACGTTTATCTTCAG GAGCCACTATTGGTGCTGCTATCGTCGAAGCAGAGGATAGTATTGAAACA GAAGAACATGAGAACAAAGAAGAATTGAAAGCAAAACTTAAGGAGTTGAT CCGTGACAAATCTGATGTTTTTAACTCCAAAAATCACGAGGAAGATAAGA TTAAACTGGGAGAACCAGGATGGAAAGAAAGGTATTATGAAGAAAAGTTT TCAGCAAAAACTCCAGAGGAAATGGAAGCAATACGAAAAGATGTTGTTTT GAGGTACACGGAAGGTCTATGTTGGGTTATGCACTATTACTATGAAGGGG TTTGTTCTTGGAGGTGGTTTTATCCTTATCATTATGCACCCTTTGCATCT GATCTAAAGGATCTTGGTCAGCTAGATATTCAGTTTGAGCTGGGCTCCCC CTTCAAACCATTCAATCAGTTATTGGGGGTTTTTCCTGCGGCAAGTGCCC ATGCACTTCCTGAGCAGTATAGGAAATTGATGACTGATCCAAATTCACCC ATTATTGATTTTTACCCAACTGATTTTGAAATTGATATGAATGGGAAGCG GTTTTCATGGCAGGGTATTGCAAAATTGCCTTTCATTGATGAAGAACGTC TTCTTGCAGAGGTTGCAAAAATAGAACATACTTTGACGGAGGAAGAAGCA CGGAGAAACAGTATAATGTGTGACATGCTTTTTGTGGCAGCATCACACCG TCTCTCAGAACAAATATTTTCTCTTGACAATCATTGCAGACATTTGACAG AGAAGGAACGAATTGAAGTCAAGGAGGAAGTCAAACCTGACTTGAGTGAT GGGATGAATGGTTACATTTCCCCTTGTGCTGGAGATACTCACCCTCCTAT ATTCAGGTCTCCAATCAAGGACATGGAAGATATATTGGCCAATGAAGTCA TATGCTGCATATATAGACTTCCAAAAGCTCATAAACATATCACCCGTCCT CCAGCTGGAGTTACATTCCCTCCTAAGATGGTGCAATTCAGTGATATGAA GCCCGAACCTGTGTTATGGCATGAAGATTCTGGAAGGAGACCTTGGGAAA ATGGAAGGTCACCTGCACAAGCTCTTCATTTGATGGAAAGGCATAACCCT CCGGGAGCCATTTCTGGCCGTAAGCTTGGGGAGGCATCACACAGACTCGT TGCTAATAGCTTACAGTTGAAGGGAGATCGTAATGGGTTCAGTAATGATA TACATGCTCCACCACCATTATATGCTGCCGCTCCGTATGTTCCACCAGTC AATTCCCATGTAAATTATGGGTTTCATAACCAGGGGCAGCATAGAATGGT TCCTCCTGGACAAGATTACCCCAGTGCAGGTTACCCCTTACCTCAAACTC CTTTGCGTCCTCCGTATGCCCATGGCTACAATGAACCCTATGGTCCTCAT CAATACCAAATTCATAACCAAGCAGCTGCCAATAATTTGCACTACCCTCC GAGACATGATCAGAATGGTGGATCAAGGCACATGCCCAGGTCTATGGCAC AAGTGTCAATGGAGGCTAGTCCTTATCCTTCTCATCAAGGTGGATATGAT GCCAACCGGATATATCAAGCACCTGGAATTGGTAGTCATCAGCAGTGGGG TGGTAGAATGGCTCCACAGGCCAACCAGGATGTTTTGGGAGGCTATGGCC TACATCAACAAGGTGTAGTTAACCGTGGTATTCATAGAGGTTATGACCAT CAGCAACAAAGAGGTAACCAATTGCATCATCAGAGGGGAGATCATCACCA GAGAGGGAGCCAGCCACACAGGGGCAATCAACAACATGGCGGCAACCAAC AACAAAGAGGAAACTCGTATGCTGCATTAGATAGGCAACGCCATAGGAGG GCCCCAGTGGAGAATAACCACTGA back to topprotein sequence of Tc08v2_p003520.2 >Tc08v2_p003520.2 ID=Tc08v2_p003520.2|Name=Tc08v2_p003520.2|organism=Theobroma cacao|type=polypeptide|length=1108bp
MGVPAFYRWLAEKYPLVIMDVIEEEPVVIDGVSIPVDTSKPNPNKLEFDN LYLDMNGIIHPCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLFM AIDGVAPRAKMNQQRSRRFRAAKDAAEAAAEEARLREEFEREGRRLPPKE ESQLFDSNVITPGTPFMAVLSIALQYYIHLRLNYDPGWKTVKVILSDANV PGEGEHKIMSYIRLQRNLPGFNPNTRHCLYGLDADLIMLALATHEVHFSI LREVVFTPGQDKCFVCGQMGHVAADCEGKAKRKAGEFDEKGDGKAVARKP YQFLNIWTLREYLEYEMRIPNLPFEMDLERVVDDFIFMCFFVGNDFLPHM PTLEIREGAINLLMAAYKKELRSLGGYLTNGSKPNLSRVEHFIQAVGSYE DKIFQKRARLHQRQAERIKREKAQARRGDDVEPQIQPDSLVPVARFHGSR LASGPSPAPFQQTMESNGNGSSGQPHKVRRLSSGATIGAAIVEAEDSIET EEHENKEELKAKLKELIRDKSDVFNSKNHEEDKIKLGEPGWKERYYEEKF SAKTPEEMEAIRKDVVLRYTEGLCWVMHYYYEGVCSWRWFYPYHYAPFAS DLKDLGQLDIQFELGSPFKPFNQLLGVFPAASAHALPEQYRKLMTDPNSP IIDFYPTDFEIDMNGKRFSWQGIAKLPFIDEERLLAEVAKIEHTLTEEEA RRNSIMCDMLFVAASHRLSEQIFSLDNHCRHLTEKERIEVKEEVKPDLSD GMNGYISPCAGDTHPPIFRSPIKDMEDILANEVICCIYRLPKAHKHITRP PAGVTFPPKMVQFSDMKPEPVLWHEDSGRRPWENGRSPAQALHLMERHNP PGAISGRKLGEASHRLVANSLQLKGDRNGFSNDIHAPPPLYAAAPYVPPV NSHVNYGFHNQGQHRMVPPGQDYPSAGYPLPQTPLRPPYAHGYNEPYGPH QYQIHNQAAANNLHYPPRHDQNGGSRHMPRSMAQVSMEASPYPSHQGGYD ANRIYQAPGIGSHQQWGGRMAPQANQDVLGGYGLHQQGVVNRGIHRGYDH QQQRGNQLHHQRGDHHQRGSQPHRGNQQHGGNQQQRGNSYAALDRQRHRR APVENNH* back to top
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