Tc08v2_t002460.1

Overview
NameTc08v2_t002460.1
Unique NameTc08v2_t002460.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1296
Properties
Property NameValue
NoteMannan endo-1,4-beta-mannosidase 7
Model evidenceSupporting evidence includes similarity to: 14 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productmannan endo-1,4-beta-mannosidase 7
Cross References
External references for this mRNA
DatabaseAccession
GeneID18591421
GenbankXM_007017527.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g002460Tc08v2_g002460Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p002460.1Tc08v2_p002460.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto387253auto387253Theobroma cacaoexon
exon-auto387254auto387254Theobroma cacaoexon
exon-auto387255auto387255Theobroma cacaoexon
exon-auto387256auto387256Theobroma cacaoexon
exon-auto387257auto387257Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto387258auto387258Theobroma cacaoCDS
CDS-auto387259auto387259Theobroma cacaoCDS
CDS-auto387260auto387260Theobroma cacaoCDS
CDS-auto387261auto387261Theobroma cacaoCDS
CDS-auto387262auto387262Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t002460.1 ID=Tc08v2_t002460.1|Name=Tc08v2_t002460.1|organism=Theobroma cacao|type=mRNA|length=1296bp
ATGAAGCAATGGGGTCTGGTTTTGTTTGTTTTTCTTTTGTTTCAAGAGCA
AGGAAGTTTTGTGCGTGTGGAAGCTGATGATGGGTTTGTCAAAACTAAAG
GAATGCAACTTATGTTGGATGGGAGCCCCTTCTATGCAAATGGGTTCAAT
GCTTACTGGCTCATGTACATGGCCGCTGATCCATCTCAGAGAAGCAAAGT
CTCAACTGCATTTCAAGAAGCTAAACAGCATGGCCTCAACATAGCCAGAA
CTTGGGCTTTCAGTGATGGTGGAGACAGACCTCTTCAGTACTCACCTGGT
TCCTACAATGAGCAAATGTTCCAGGGATTGGATTTTGTAGTGTCTGAGGC
TAAGAGATATGGGATTAAGCTAATCTTAAGTTTTGTGAATAACTATGATC
AATTTGGAGGGAAAAAACAGTATGTGAACTGGGCAAGAAATCAAGGACAG
TCCCTTGGCTCTGACGAAGATTTCTTTACAAACTCTGTTGTGAAGGAATA
TTACAAGAACCATATCAAGACTGTTCTTACAAGAAGAAACAGCCTGACCG
GAGTGGCTTACAAAGATGAACCAACAATAATGGCATGGGAGCTTATGAAT
GAGCCCAGGTGCTACTCGGACCCATCAGGAAGGACCATGCAGTCCTGGAT
TACAGAGATGGCTTCTCATGTGAAGTCCGTTGATGGAAATCACTTGCTAG
AAGCTGGTTTGGAAGGGTTTTATGGCCCATCATCGTCTCAAAAGCAGCAG
TATAACCCTAACTTCCAAGTAGGAACTGATTTCATTGCAAACAATCAGAT
CCCGGGCATTGATTTCGCTACAGTTCACTCTTATCCCGACCAATGGTTAC
AAAGCTCAAGCGAAGAAAGCCAAATTGCCTTCCTGAATAATTGGCTGAAC
AATCACATTCAGGATGCTCAGAACATCCTCCAGAAGCCATTGCTGTTTGC
TGAGTTTGGAAAATCATTGAAAATCTCTGGTCCTAGCCAAAGAGACGAGC
TGTTCAACACCGTGTACACAGCAATTTACTCTTCAGCTAGGGGTGGAGGT
ACAGCAATCGGTGGATTATTCTGGCAGCTTTTCGCTGAAGGAATGGACTC
TTTCCGAGATGGGTACGAGGTAATCCTGAGCGAAGGCACCTCAACCGTCA
ACATCATCACTCAAGAGTCTCAGAAACTTAATCGGATTAGGAAGATGTAT
GTGAGGTTAAGGAACATGGAGAAATGGAAGAAAGCTAGGGATATCAGAAG
GGCACAATGGTGGGCTGGGAATGGTGGCAGTAACACAGGAAATTGA
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protein sequence of Tc08v2_p002460.1

>Tc08v2_p002460.1 ID=Tc08v2_p002460.1|Name=Tc08v2_p002460.1|organism=Theobroma cacao|type=polypeptide|length=432bp
MKQWGLVLFVFLLFQEQGSFVRVEADDGFVKTKGMQLMLDGSPFYANGFN
AYWLMYMAADPSQRSKVSTAFQEAKQHGLNIARTWAFSDGGDRPLQYSPG
SYNEQMFQGLDFVVSEAKRYGIKLILSFVNNYDQFGGKKQYVNWARNQGQ
SLGSDEDFFTNSVVKEYYKNHIKTVLTRRNSLTGVAYKDEPTIMAWELMN
EPRCYSDPSGRTMQSWITEMASHVKSVDGNHLLEAGLEGFYGPSSSQKQQ
YNPNFQVGTDFIANNQIPGIDFATVHSYPDQWLQSSSEESQIAFLNNWLN
NHIQDAQNILQKPLLFAEFGKSLKISGPSQRDELFNTVYTAIYSSARGGG
TAIGGLFWQLFAEGMDSFRDGYEVILSEGTSTVNIITQESQKLNRIRKMY
VRLRNMEKWKKARDIRRAQWWAGNGGSNTGN*
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