Tc08v2_t001760.1

Overview
NameTc08v2_t001760.1
Unique NameTc08v2_t001760.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length936
Properties
Property NameValue
Model evidenceSupporting evidence includes similarity to: 5 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productprotein BRASSINAZOLE-RESISTANT 1
NoteProtein BRASSINAZOLE-RESISTANT 1
Cross References
External references for this mRNA
DatabaseAccession
GeneID18591343
GenbankXM_007017404.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g001760Tc08v2_g001760Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p001760.1Tc08v2_p001760.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto385732auto385732Theobroma cacaoexon
exon-auto385733auto385733Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto385734auto385734Theobroma cacaoCDS
CDS-auto385735auto385735Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t001760.1 ID=Tc08v2_t001760.1|Name=Tc08v2_t001760.1|organism=Theobroma cacao|type=mRNA|length=936bp
ATGACGTCAGATGGTGCGACGTCGACGCCGGCGCCGAGGAGGAAGCCGTC
GTGGAGGGAGAGAGAGAATAACAGGAGAAGAGAGAGGAGGAGGAGAGCTA
TTGCTGCTAAGATATATACTGGGCTTAGAGCTCAAGGAAATTACAATTTG
CCCAAGCACTGTGATAACAATGAGGTTCTGAAAGCTCTTTGTGCGGAGGC
TGGTTGGGTCGTTGAAGAAGATGGCACCACTTATCGGAAGGGATGTAAGC
CACCTCCAATTGATATACCAGGCAGTTCAGCTAAAATTACTCCATTTTCT
TCCCAAAATCCGAGTCCCTTATCTTCTGCATTTCCAAGTCCAATTCCTTC
CTGTCAAGTCAGTCCTTCCTCCTCTTCCTTCCCTAGTCCAACTAGGCTTG
ATGCTAATAACCCGTCTAGTCTCCTTCCATTCCTTCGAAGTGCCATTCCT
TCATCTCTGCCTCCTCTCAGAATCTCGAACAGTGCCCCTGTGACACCGCC
ACTTTCATCTCCAACCTCAAGAAACCCTAAGCCGATTCCCAACTGGGAAG
CCATTGCTAAAGAGTCCATGGCCTCTTTTAACTACCCTTTTTATGCTGTA
TCTGCTCCAGCTAGTCCAACCCACCGTCATTTTCATGCTCCGGCCACTAT
ACCTGAATGCGATGAATCTGATACATCCACTGTTGAATCTGGTCAATGGA
TAAGCTTTCAAAAGTTTGCACCTTCTACATCTCAAATGCCAACTTCTCCA
ACATTTAACCTTGTGAAACCTGTGGTTCCACAAAGTTTGCCCAATGATCT
GATCATGGAGAAAGGGCGAGGTTCGGAGTTTCAGTTTGAGAGTGGACAGG
TGAAGCCGTGGGAAGGAGAGAGGATTCATGAAGTAGGACTGGATGATCTG
GAGCTCACGCTTGGAAGCGGGAAGGCTCGGTGTTAA
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protein sequence of Tc08v2_p001760.1

>Tc08v2_p001760.1 ID=Tc08v2_p001760.1|Name=Tc08v2_p001760.1|organism=Theobroma cacao|type=polypeptide|length=312bp
MTSDGATSTPAPRRKPSWRERENNRRRERRRRAIAAKIYTGLRAQGNYNL
PKHCDNNEVLKALCAEAGWVVEEDGTTYRKGCKPPPIDIPGSSAKITPFS
SQNPSPLSSAFPSPIPSCQVSPSSSSFPSPTRLDANNPSSLLPFLRSAIP
SSLPPLRISNSAPVTPPLSSPTSRNPKPIPNWEAIAKESMASFNYPFYAV
SAPASPTHRHFHAPATIPECDESDTSTVESGQWISFQKFAPSTSQMPTSP
TFNLVKPVVPQSLPNDLIMEKGRGSEFQFESGQVKPWEGERIHEVGLDDL
ELTLGSGKARC*
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