Tc08v2_t000720.1

Overview
NameTc08v2_t000720.1
Unique NameTc08v2_t000720.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length294
Properties
Property NameValue
NoteUncharacterized protein
Model evidenceSupporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
CommentThe sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
Productpolcalcin Phl p 7
Cross References
External references for this mRNA
DatabaseAccession
GeneID18591225
GenbankXM_018126073.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g000720Tc08v2_g000720Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p000720.1Tc08v2_p000720.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto383533auto383533Theobroma cacaoexon
exon-auto383534auto383534Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto383535auto383535Theobroma cacaoCDS
CDS-auto383536auto383536Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t000720.1 ID=Tc08v2_t000720.1|Name=Tc08v2_t000720.1|organism=Theobroma cacao|type=mRNA|length=294bp
ATGGCCCTTAAAACTCGCAGCTACTCCGTCGATGGCAAGCGTGAAATGAC
GATCGATGAGTTCAAAAGATACTTGAAGAAATTTGATGATGATAAAGATG
GCAGGATAAGCAGAGACGAGCTTGCAAATGCTATACGAGCAGCGGGAGGA
TGGTTTGCTACGAGGAAGAGCAAGCATGCAATACGTTCCGTGGATGCCAA
TGGCAATGGCTTCATTGATGACAATGAGAAAAAACCTGGCGGAGTTTGCA
GAGAAGCACTTGAACGTGAGAATTTTGTATTTCTGAAGTGTTAA
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protein sequence of Tc08v2_p000720.1

>Tc08v2_p000720.1 ID=Tc08v2_p000720.1|Name=Tc08v2_p000720.1|organism=Theobroma cacao|type=polypeptide|length=98bp
MALKTRSYSVDGKREMTIDEFKRYLKKFDDDKDGRISRDELANAIRAAGG
WFATRKSKHAIRSVDANGNGFIDDNEKKPGGVCREALERENFVFLKC*
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