Tc08v2_t000070.2

Overview
NameTc08v2_t000070.2
Unique NameTc08v2_t000070.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1095
Properties
Property NameValue
NoteCyclin-D3-1
Model evidenceSupporting evidence includes similarity to: 4 ESTs, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
Productcyclin-D3-1, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID18591134
GenbankXM_018125973.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc08v2_g000070Tc08v2_g000070Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc08v2_p000070.2Tc08v2_p000070.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto382441auto382441Theobroma cacaoexon
exon-auto382442auto382442Theobroma cacaoexon
exon-auto382443auto382443Theobroma cacaoexon
exon-auto382444auto382444Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto382445auto382445Theobroma cacaoCDS
CDS-auto382446auto382446Theobroma cacaoCDS
CDS-auto382447auto382447Theobroma cacaoCDS
CDS-auto382448auto382448Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc08v2_t000070.2 ID=Tc08v2_t000070.2|Name=Tc08v2_t000070.2|organism=Theobroma cacao|type=mRNA|length=1095bp
ATGGCTTTGAATCATCAAAACCCTACATTCGTTGTCGATGCTCTTTATTG
TTCAGAAGAGAATTGGGACGAAGAAGTCGGAGAAGACCATTTTCTAGAGG
TAGAGGAAGAAAGTTGTTACAATAACGGGATTAATAAATCAAACCCTTTT
CCAATCTTGTTAGAACAAGACTTATTCTGGGAAGATGATGAACTTTCCTC
TTTACTTTCAAAGGAAGAGCAAAATCAACTGTACGATAGCCTTCAAACCA
ATGGGAATCCAGCTGGGGCTCGCCGTGAAGCTGTGGAATGGATGTTAAAA
GTCAATGCTCACTATTCCTTCTCTGCTCTAACTGCTGTTCTTGCTGTCAA
CTATCTTGATAGATTCTTGTTTAGCTTCCGGTTCCAAAATGAGAAGCCAT
GGATGAGTCAACTAGCTGCTGTAGCTTGTCTTTCTCTTGCAGCCAAAGTG
GAGGAAACCCAAGTTCCTCTCCTATTGGATCTACAAGTGGAGGAGAACAG
GTATGTGTTTGAAGCCAAAGCTATCCAAAGAATGGAGGTTTTGGTACTGT
CCACTCTTCAATGGAAGATGAACCCTGTAACCCCACTTTCATTTCTTGAT
TACATTGCAAGGAGGCTTGGACTAAAGGACCATCTTTGTTGGGAATTTCT
TAGGAGATGTGGCCGCATTCTGCTCTCTGTCATTTCAGATTCTAGGTTTA
TGTGCTACCTTCCTTCTGTAATGGCCACTGCTACAATGCTGCACGTTGTG
GATAGTGTAGAACCTAATCTTAGAGTAGAATACCAAAACCAGCTATTAGG
CATCCTGGGAATCGATAAGGAGAAGGTAGATAAATGCTGTAAGTTGATAA
TAGAATTGGCAACAAGAGTCCAAGGCAACCAATCAAACAAGCGCAGGTTT
AGCTCCATTCCAGGAAGCCCAAATGGCGTAATGGATTTGTCGTTTAGTTC
TGATAGCTCAAACGACTCCTGGGCAGCGGCATCATCTGTGTCTTCCTCAC
CTGAGCCTGTGTCCAAGAAGAGCAGATCTCAACAAGAGCAGCTTTTGCGA
AGGCTAAGCCATGATCCTTCAGACTTTCTCAGCATTCCTCGCTAA
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protein sequence of Tc08v2_p000070.2

>Tc08v2_p000070.2 ID=Tc08v2_p000070.2|Name=Tc08v2_p000070.2|organism=Theobroma cacao|type=polypeptide|length=365bp
MALNHQNPTFVVDALYCSEENWDEEVGEDHFLEVEEESCYNNGINKSNPF
PILLEQDLFWEDDELSSLLSKEEQNQLYDSLQTNGNPAGARREAVEWMLK
VNAHYSFSALTAVLAVNYLDRFLFSFRFQNEKPWMSQLAAVACLSLAAKV
EETQVPLLLDLQVEENRYVFEAKAIQRMEVLVLSTLQWKMNPVTPLSFLD
YIARRLGLKDHLCWEFLRRCGRILLSVISDSRFMCYLPSVMATATMLHVV
DSVEPNLRVEYQNQLLGILGIDKEKVDKCCKLIIELATRVQGNQSNKRRF
SSIPGSPNGVMDLSFSSDSSNDSWAAASSVSSSPEPVSKKSRSQQEQLLR
RLSHDPSDFLSIPR*
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