Tc07v2_t011670.4

Overview
NameTc07v2_t011670.4
Unique NameTc07v2_t011670.4
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length2247
Properties
Property NameValue
NoteEthylene receptor
Model evidenceSupporting evidence includes similarity to: 7 ESTs, 90 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
Productethylene receptor, transcript variant X4
Cross References
External references for this mRNA
DatabaseAccession
GeneID18594532
GenbankXM_018125099.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g011670Tc07v2_g011670Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p011670.4Tc07v2_p011670.4Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto375482auto375482Theobroma cacaoexon
exon-auto375483auto375483Theobroma cacaoexon
exon-auto375484auto375484Theobroma cacaoexon
exon-auto375485auto375485Theobroma cacaoexon
exon-auto375486auto375486Theobroma cacaoexon
exon-auto375487auto375487Theobroma cacaoexon
exon-auto375488auto375488Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto375489auto375489Theobroma cacaoCDS
CDS-auto375490auto375490Theobroma cacaoCDS
CDS-auto375491auto375491Theobroma cacaoCDS
CDS-auto375492auto375492Theobroma cacaoCDS
CDS-auto375493auto375493Theobroma cacaoCDS
CDS-auto375494auto375494Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t011670.4 ID=Tc07v2_t011670.4|Name=Tc07v2_t011670.4|organism=Theobroma cacao|type=mRNA|length=2247bp
ATGGAGTCTTGCAACTGCATTGAGCCACAGTGGCCAGCGGATGAACTGTT
GATGAAATATCAATATATTTCTGATTTCTTCATTGCACTTGCTTATTTCT
CAATCCCTTTAGAGCTTATATACTTTGTCAAGAAATCTGCTGTGTTTCCA
TATAGATGGGTCCTTGTGCAGTTTGGAGCCTTTATAGTACTTTGTGGGGC
AACACATCTTATTAACTTGTGGACTTTTACAATGCATTCAAGAACTGTGG
CAGTAGTAATGACCACTGCAAAGGTTTTGACTGCTGTGGTATCATGTGCA
ACTGCCTTGATGCTTGTACATATTATTCCTGATCTGTTGAGCGTTAAAAC
TAGAGAACTATTTTTGAAAAATAAGGCTGCAGAGCTTGATAGAGAAATGG
GTCTGATTCGTACGCAAGAGGAAACAGGTCGACATGTTAGGATGCTTACT
CATGAGATAAGAAGCACTTTGGATAGACATACAATACTAAAAACCACTCT
TGTTGAATTGGGTCGAACTTTGGGTCTAGAAGAATGTGCCTTGTGGATGC
CAACACGTACTGGGTTAGAGCTCCAACTTTCATACACTCTTCGCCAACAG
AATCCAGTTGGGTATACTGTACCCATTCATCTACCTGTGATCAATCAAGT
ATTTAGTAGCAGTCGTGCGGTAAAAATATCCCCAAATTGTCCTGTGGCAA
GACTACGGCCTCTTTCAGGGAAGTATGTGCCTGGGGAGGTGGTTGCTGTC
CGTGTCCCACTCCTGCATCTCTCTAATTTCCAAATTAATGATTGGCCAGA
ACTTTCAACAAAACGCTATGCTTTGATGGTTTTGATGCTCCCTTCAGATA
GTGCAAGGCAATGGCATGGTCACCAGTTGGAGCTTGTTGAAGTGGTTGCT
GATCAGGTGGCAGTTGCTCTTTCGCATGCCGCAATCTTAGAAGAGTCAAT
GAGGGCTAGGGATCTTCTCATGGATCAGAATGTTGCACTTGATCTAGCCA
GAAGAGAAGCAGAGACAGCAATTCGTGCTCGAAATGATTTCTTGGCTGTT
ATGAATCATGAGATGAGAACCCCAATGCATGCGATTATTGCTCTATCTTC
TTTGCTGCAGGAAACTGAGTTGACACCTGAACAGCGTCTGATGGTTGAAA
CAATTCTTAAAAGTAGTAATCTTCTTGCTACTCTAATAAATGATGTATTG
GATGTTTCGAGGCTCGAAGATGGCAGCCTTCAACTAGACCTTGGAATTTT
TAACCTTTGTGCTGTATTCAGAGAGGTCCTTAACTTGATCAAGCCGATTG
CTTCTGTCAAAAAGCTTCATGTTTCATTAAATTTGGCTCCAGACTTGCCA
GAATATGCCATTGGCGATGAGAAGCGCCTGATGCAAACAATTTTAAACGT
TGTTGGTAATGCTGTGAAATTTACGAAGGAGGGCAGCATTTCAATCACTG
CTTTTGTTGCTAAATCAGAATCACTCAGAGATTCTCGAGCCCCTGAATTT
TTCCCTGTTCCAAGTGATAATCACTTTTATTTGCGTGTACAGGTGAAAGA
TTCAGGTTCAGGGATTAGCACTCAAGATATTCCCAAGTTATTTACCAAAT
TTGCACAAACTCAATCAACAGCAACACGAAATTCTGGTGGCAGTGGACTA
GGTCTTGCAATTTGTAAGAGGTTTGTAAATCTAATGGAGGGACATATTTG
GATTGAGAGTGAAGGCCTTGGTAAGGGATGTACTGCTATCTTCACTGTAA
AACTCGGGATCCCAGAACGCTTGAATGAATCTAAACTTCCCCTTATGCCT
AAAGTGTCATCAAATCATGGGCAGACATCTTTTTCTGGGCTTAAAGTTCT
GGTTATGGATGAGAACGGGGTTAGCAGGATGGTGACTAAGGGGCTTCTCG
TGCATCTAGGGTTCGAGGTTACAATGGTAAGCTCCAGTGACGAGTGTTTG
CATGTGGTTTCTCACGAGCACAAGGTTGTTCTCATGGATGTATGTGTACC
TGGCATGGATGGTTATGAAATTGCTGTCCAAATACATGAGAAATTCACAA
AAAGCCATGAAAGGCCCTTAATAGTGGCGCTCACTGGAAATACAGACAAA
GTAACAAAAGAGAACTGCATGAGGGTTGGTATGGATGGTGTTATATTGAA
ACCTGTTTCACTTGATAAAATGAGAAGTGTTTTATCGGATCTTCTGGAGC
ACCGATTTTTTCGAGGCCATATAGAGATGAAGAATATCGGTGATTGA
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protein sequence of Tc07v2_p011670.4

>Tc07v2_p011670.4 ID=Tc07v2_p011670.4|Name=Tc07v2_p011670.4|organism=Theobroma cacao|type=polypeptide|length=749bp
MESCNCIEPQWPADELLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFP
YRWVLVQFGAFIVLCGATHLINLWTFTMHSRTVAVVMTTAKVLTAVVSCA
TALMLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLT
HEIRSTLDRHTILKTTLVELGRTLGLEECALWMPTRTGLELQLSYTLRQQ
NPVGYTVPIHLPVINQVFSSSRAVKISPNCPVARLRPLSGKYVPGEVVAV
RVPLLHLSNFQINDWPELSTKRYALMVLMLPSDSARQWHGHQLELVEVVA
DQVAVALSHAAILEESMRARDLLMDQNVALDLARREAETAIRARNDFLAV
MNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVL
DVSRLEDGSLQLDLGIFNLCAVFREVLNLIKPIASVKKLHVSLNLAPDLP
EYAIGDEKRLMQTILNVVGNAVKFTKEGSISITAFVAKSESLRDSRAPEF
FPVPSDNHFYLRVQVKDSGSGISTQDIPKLFTKFAQTQSTATRNSGGSGL
GLAICKRFVNLMEGHIWIESEGLGKGCTAIFTVKLGIPERLNESKLPLMP
KVSSNHGQTSFSGLKVLVMDENGVSRMVTKGLLVHLGFEVTMVSSSDECL
HVVSHEHKVVLMDVCVPGMDGYEIAVQIHEKFTKSHERPLIVALTGNTDK
VTKENCMRVGMDGVILKPVSLDKMRSVLSDLLEHRFFRGHIEMKNIGD*
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