Tc07v2_t007510.1

Overview
NameTc07v2_t007510.1
Unique NameTc07v2_t007510.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1776
Properties
Property NameValue
NoteIndole-3-acetic acid-amido synthetase GH3.17
Model evidenceSupporting evidence includes similarity to: 2 ESTs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
Productindole-3-acetic acid-amido synthetase GH3.17
Cross References
External references for this mRNA
DatabaseAccession
GeneID18594013
GenbankXM_007021454.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g007510Tc07v2_g007510Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p007510.1Tc07v2_p007510.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto367755auto367755Theobroma cacaoexon
exon-auto367756auto367756Theobroma cacaoexon
exon-auto367757auto367757Theobroma cacaoexon
exon-auto367758auto367758Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto367759auto367759Theobroma cacaoCDS
CDS-auto367760auto367760Theobroma cacaoCDS
CDS-auto367761auto367761Theobroma cacaoCDS
CDS-auto367762auto367762Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t007510.1 ID=Tc07v2_t007510.1|Name=Tc07v2_t007510.1|organism=Theobroma cacao|type=mRNA|length=1776bp
ATGGCAACAGAGAGGCACCAAGCTGGTTTAGAGATTTTTGAGTACCTGAC
CACCAATGCGCATCAAATACAAGAACAAGTATTAGAGGAGATACTTAATC
GAAATGCAAGAACAGAGTATCTGAGGGGCTTTCTTAATGGCCAATGTGAC
AAGCAACTCTTCAAAAAGAATGTTCCCATTATTACTTACCAAGATGTTGA
GCCTTACATAAATAGGATCGCTAATGGGGAGCCATCGGATATCCTTTTGG
CTGAACCTCTTACTGGGTTCTATCGAAGCACTGGAACTTCAGGAGGGCAA
CCAAAACTGATACCTTCAATTGATGAAGAGGACAAATTGGTATTACGTGA
TACCCTAATAGAATCTGTCATTAGAAAGCACTTTGGTGACTTAGATAAAG
CCGGAAAAAGAATGGAACTTATGTTTGCCAAACCAGAGATTGAAACTCCA
TCTGGCTTAATGGCAAGAACTGCCACAACAGTTTTATTCAAGCGCAGTAG
CTTTATAAACATCTTACCCAAGCTTTACACAAGCCCAATTGAGACAATCT
TTTGCTTAGACACCAACCAGAGCATGTATTGTCAATTACTTGCAGGTTTA
ATACAGCGAGATGAGGTTGTAAGGATTGGCTCAATCTTTGCATCTGCAGT
GCTAAGAGCTATCAAGTGTTTAGAAGATCGTTGGAAAGAGCTATGCTCTA
ACATAAAAACAGGTCATGTAAGCGATTGGATCACAGACTCAGGATGTAGA
AATGCACTGTCATTGATCTTGAAGCCTAATCCAGATTTGGCTGATTCAAT
AGAAAACATATGCGGTTGTGAATCATGGGAAGGAATAATCAAAAAGCTTT
GGCCTAAAGCAAAGTATATCGGTGCCATTACTACAGGTTTTATGAGTCAA
TATACTGCAGCACTTGAATTCTACAGTGGAGGGCTCCCTTTAGTGTCAAG
CTTTTATGTTTGCTCTGAAGCTATGTGTGGGATCAATCTAGAACCTCTAA
AAAGGCATGCTGATGTCTCCTACACCATTGTCCCCAATATGGCGTACTTT
GAGTTCCTTCCTGTGAAGAAAGATTGTCCAACAATATTTCCAGATCAGGT
TGGGGTTTCACACCAAGAATCGAAGGAAATGAAGAGCAACAATGAAGTTA
TTGAACCTGTTGATCTTGTAAATGTGGAGCCTGGTCAATGTTATGAACTA
ATTGTCACAACTTCTGCAGGCTTATATCGTTACAAAATTGGAGATATTCT
TATGGCAACTGGTTTCCACAATAATGCACCTCAATTCCAATTTGTGGAGC
GACAAAATGTAATTCTAAGTATTGATGCAGAAAAAACAAGTGAAGCAGAC
CTCTTAAGGGCAGTGACAAAAGCAAAGGCTCTTCTTGATCCACTTGGCTT
TCTCTTGACAGGGTACTCTAGCTATGCTGATACTTCATCAACACCAGGTT
ACTATGTATTATTTTGGGAACTTAAGAGGAAGGAAAGCAACGATACGAAA
GAGCTTGATCCCAAGATAATGGTAGAATGTTGCTCCAGAATGGAAGAGTC
ACTCAATTACACGTATAAAGTCTATAGGAAGGAAAATACAATTGCACCTT
TGGAGATTAGGGTGGTAAAGGAAGGAACTTTTGATGCCCTTATGGATTAC
TATGTATCACAAGGAGTTTCTATGAGCCAATACAAGGCACCTAGTTGCAT
CAAATCTAAGGAAGTCATGAAAATTTTAGATTCCGGAGTGATAGGAAAGT
TTTCCAATCCGGAAATTCGTTTTTGA
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protein sequence of Tc07v2_p007510.1

>Tc07v2_p007510.1 ID=Tc07v2_p007510.1|Name=Tc07v2_p007510.1|organism=Theobroma cacao|type=polypeptide|length=592bp
MATERHQAGLEIFEYLTTNAHQIQEQVLEEILNRNARTEYLRGFLNGQCD
KQLFKKNVPIITYQDVEPYINRIANGEPSDILLAEPLTGFYRSTGTSGGQ
PKLIPSIDEEDKLVLRDTLIESVIRKHFGDLDKAGKRMELMFAKPEIETP
SGLMARTATTVLFKRSSFINILPKLYTSPIETIFCLDTNQSMYCQLLAGL
IQRDEVVRIGSIFASAVLRAIKCLEDRWKELCSNIKTGHVSDWITDSGCR
NALSLILKPNPDLADSIENICGCESWEGIIKKLWPKAKYIGAITTGFMSQ
YTAALEFYSGGLPLVSSFYVCSEAMCGINLEPLKRHADVSYTIVPNMAYF
EFLPVKKDCPTIFPDQVGVSHQESKEMKSNNEVIEPVDLVNVEPGQCYEL
IVTTSAGLYRYKIGDILMATGFHNNAPQFQFVERQNVILSIDAEKTSEAD
LLRAVTKAKALLDPLGFLLTGYSSYADTSSTPGYYVLFWELKRKESNDTK
ELDPKIMVECCSRMEESLNYTYKVYRKENTIAPLEIRVVKEGTFDALMDY
YVSQGVSMSQYKAPSCIKSKEVMKILDSGVIGKFSNPEIRF*
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