Tc07v2_t007490.1

Overview
NameTc07v2_t007490.1
Unique NameTc07v2_t007490.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1785
Properties
Property NameValue
NoteIndole-3-acetic acid-amido synthetase GH3.17
Model evidenceSupporting evidence includes similarity to: 1 EST, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
Productindole-3-acetic acid-amido synthetase GH3.17
Cross References
External references for this mRNA
DatabaseAccession
GeneID18594011
GenbankXM_007021452.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g007490Tc07v2_g007490Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p007490.1Tc07v2_p007490.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto367739auto367739Theobroma cacaoexon
exon-auto367740auto367740Theobroma cacaoexon
exon-auto367741auto367741Theobroma cacaoexon
exon-auto367742auto367742Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto367743auto367743Theobroma cacaoCDS
CDS-auto367744auto367744Theobroma cacaoCDS
CDS-auto367745auto367745Theobroma cacaoCDS
CDS-auto367746auto367746Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t007490.1 ID=Tc07v2_t007490.1|Name=Tc07v2_t007490.1|organism=Theobroma cacao|type=mRNA|length=1785bp
ATGGCAGCAGATAGGCACCAAGCTGGCTTAAAGATTTTGGAGAAGTTGAC
CACCGATGCTTACCAAATACAAGAACAGGTACTGGAGGACATACTTAATC
GAAATGCAGGAACAGAATACCTAAGGGGCTTCCTAAATGGCCAATGCGAC
AAGCAACACTTCAAAAAGAATGTTCCCATTGTTACCTATGATGATATTGA
GCCTTACATCCATCGGATCGCCAATGGGGAGTCATCAGATATCCTTTTAG
CTGAACCTGTCACTGGGTTCTATCGAAGCACTGGAACTTCAGGAGGACAA
CCAAAGCTGATACCTTCAACTGCTGAAAAGGACAAAGGGGCATTATTTCA
GACCCTAATGGGATCTGTGATGAACAAGCACTTTGGTGACTTAGATAAAG
CCGGAAAAAGTATGCAACTTTTGTTTACCAAACCAGAGATTGAAACTCCA
TCTGGCCTACTGGCAACAACTGCTACAACAAGCATATTCAAGGACAGTGG
CTTTAGAAACATTGTGTCCATGCGTTACACAAGCCCAATTGAGACAATCT
TTTGTTCAGACATCAACCAGAGCATGTATTGCCAATTACTTGTTGGTTTA
ATACAGCGGGATAAGGTTGTATCGGTTGGCTCAATCTTTGCATCTGCAAT
GGTAAGAGCTATCAAGTTTATAGAAGATCACTGGGAAGAGCTATGCTACA
ACATAAAAACAGGTCACTTAAGCAGTTGGATCAGTGACTCAGGATGCAAA
AATGCTCTGTCATTGATCATGAAGCCTAATCCAGATTTGGCTGATTCAAT
AGAAAATATATGTGGTTGTAAATCATGGGAAGGAATAATCAGAAAGCTTT
GGCCTAAAGCAAAGTATATTGGTGCTGTTGCTACAGGCGTTATGAGTCAA
TATACTGCAGCACTCGATTTCTACAGTGGAGGGCTCCCTTTAGTGTCAAG
TGCTTATGTTTGTTCTGAAGCTATGTGTGGGATCAATTTAGAACCTCTAA
GCAAGCCTGCTGATGTCTCTTACACCTTCCTCTCCAATATGGCATACTTT
GAATTCCTTCCTGTGAAGAAAGATTGTCTAACAATGTTTCTGGATCAGGT
TCAGTTTAATAGTGTTGCACGCCAAGAGTCCAAGGAAATGATGAGCAGCA
TTGAAGCTATTGAACCTGTTGATCTTGTGAATGTGGAGCCTGGTCAATGT
TATGAACTGGTTGTCACAACTTCTGCAGGCTTATACCGGTACAAAGTTGG
AGATATTCTTATGGCAACGGGTTTCTACAATAATGCACCTCAATTCCAGT
TTGTTGAGCGACAAAATGTAATTCTAAGTATTGATGCAGAAAAAACAAGC
GAAGTAGACCTCTTAAGGGCAGTGACAAAAGCAAAGGCTCTTCTTGATCC
GCTTGGCTTTCTGTTGACAGGGTACACTAGCTATGCTGATACTTCATCAA
CACCAGGTCACTACATATTATTTTGGGAACTTAAGATGAAGGAAAGCAAT
GACATGAAAGAGCCTGATCCCAAGATAATGGTAGAATGTTGCTTCAGCAT
GGAAGAGTCACTCAATTACACGTACAGAATGTATAGGAAGGAAAATATAA
TTGCACCTTTGGAGCTTAGGGTGGTAAAACAGGGAACTTTTGATGCCCTA
ATGGATTACTATGTATCACAAGGAGCTTCTATGAGCCAATACAAGGGACC
TAGTTGCATCAAATCTAAGCAAGCCATAAAGATTTTAGATTCCAGAGTGA
TGGGAAAGTTTTTCAGCGTGGAAACTCAGTTTTGA
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protein sequence of Tc07v2_p007490.1

>Tc07v2_p007490.1 ID=Tc07v2_p007490.1|Name=Tc07v2_p007490.1|organism=Theobroma cacao|type=polypeptide|length=595bp
MAADRHQAGLKILEKLTTDAYQIQEQVLEDILNRNAGTEYLRGFLNGQCD
KQHFKKNVPIVTYDDIEPYIHRIANGESSDILLAEPVTGFYRSTGTSGGQ
PKLIPSTAEKDKGALFQTLMGSVMNKHFGDLDKAGKSMQLLFTKPEIETP
SGLLATTATTSIFKDSGFRNIVSMRYTSPIETIFCSDINQSMYCQLLVGL
IQRDKVVSVGSIFASAMVRAIKFIEDHWEELCYNIKTGHLSSWISDSGCK
NALSLIMKPNPDLADSIENICGCKSWEGIIRKLWPKAKYIGAVATGVMSQ
YTAALDFYSGGLPLVSSAYVCSEAMCGINLEPLSKPADVSYTFLSNMAYF
EFLPVKKDCLTMFLDQVQFNSVARQESKEMMSSIEAIEPVDLVNVEPGQC
YELVVTTSAGLYRYKVGDILMATGFYNNAPQFQFVERQNVILSIDAEKTS
EVDLLRAVTKAKALLDPLGFLLTGYTSYADTSSTPGHYILFWELKMKESN
DMKEPDPKIMVECCFSMEESLNYTYRMYRKENIIAPLELRVVKQGTFDAL
MDYYVSQGASMSQYKGPSCIKSKQAIKILDSRVMGKFFSVETQF*
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