Tc07v2_t003020.2

Overview
NameTc07v2_t003020.2
Unique NameTc07v2_t003020.2
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1134
Properties
Property NameValue
NoteATP synthase gamma chain 1, chloroplastic
Model evidenceSupporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
ProductATP synthase gamma chain 1, chloroplastic-like, transcript variant X1
Cross References
External references for this mRNA
DatabaseAccession
GeneID108662922
GenbankXM_018124662.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g003010Tc07v2_g003010Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p003020.2Tc07v2_p003020.2Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto360352auto360352Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto360353auto360353Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t003020.2 ID=Tc07v2_t003020.2|Name=Tc07v2_t003020.2|organism=Theobroma cacao|type=mRNA|length=1134bp
ATGTATTCTTCAAATCTACCGACTTGGATCTCATCAAAACCTTCAAATTC
CAACAAAAATGTACTCTTTCATCAATTTTACCAAAACCCATTTCTCCAAT
TCCCTCAAATATTACCCCTCAAAAGCCTCTCTCAATCTCCTTCACCTTTT
GCTCCAGTTCAAAGCAGTCTTCGTGAGCTCCAAGAGCTGATTGCAACCGT
AAAAAACACTCAAAAAATCACTGAAGCAATGAAGCTGGTGGCAGCTGCAA
AGGTGAGGAGAGCTCAAGAAGCTGTCATCAATGGTAGGCCTTTTACTAAG
GCTTTAGTTGAGTTCCTTTACACCATTATTGAAAATTTACAATGTGAAGA
TATTGATTGTCCTTTAACTGTTATTAGACCTGTAAGGAAAGTAGCTCTCG
TTGTTGTAACTGGTGATAGGGATCTTTGTGGTAGTTTCAACAATGCAGTG
ATTAGAAAGGCTGAGTCCCGGATAGCGGAATTGAAAGGTCTTGGATTGGA
TTTTACTGTTATTAGTGTAGGGAAAAAGGGTAATTCTTATTTAAGGCGTA
GGGATCATGTTTCGGTTGACAGGTTTGTTGAAGGAGGAGGGTTTCCTACG
GCGAAAGAGGCTCAAATAATTGCTGATGATGTTTTTTCATTATTTGTTAC
TGAAGAGGTTGATAAGGTTGAGCTTGTATATACAAAGTTTGTATCTTTGG
TGAAGTCAGATCCAGTAATCCGTACTTTGCTTCCATTGTCAGTGAAAGGA
AAGGTTTTTGATGTGAATGGGACTTGTGTTGATGCTATGGAAGATGAGTT
GTTTAGGTTGACAACCAAGAGCGGGAAGCTGATCGTGGAGAGGGATAGGG
TGAGGATGGAAGGGGGGGGAACTTCACCTCTTATGCAGTTTGAGCAAGAT
CCAGTTCAGATTCTCGATGCCATGATGCCTCTCTATTTGAATAGTCAGAT
CTTGAGGGCAATGCAGGAATCATTGGCGAGTGAGCTGGCAGCTAGAATGA
ACGCAATGAGTAATGTTACTGATAATGCAGTTGAGTTGAGGAAGAATCTT
TCTATTGTTTATAATCGGGAACGACAGGCAAAAATCACTGGTGAGATTTT
GGAGATTGTTGCTGGAGCTGAGGCACTTACATAG
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protein sequence of Tc07v2_p003020.2

>Tc07v2_p003020.2 ID=Tc07v2_p003020.2|Name=Tc07v2_p003020.2|organism=Theobroma cacao|type=polypeptide|length=378bp
MYSSNLPTWISSKPSNSNKNVLFHQFYQNPFLQFPQILPLKSLSQSPSPF
APVQSSLRELQELIATVKNTQKITEAMKLVAAAKVRRAQEAVINGRPFTK
ALVEFLYTIIENLQCEDIDCPLTVIRPVRKVALVVVTGDRDLCGSFNNAV
IRKAESRIAELKGLGLDFTVISVGKKGNSYLRRRDHVSVDRFVEGGGFPT
AKEAQIIADDVFSLFVTEEVDKVELVYTKFVSLVKSDPVIRTLLPLSVKG
KVFDVNGTCVDAMEDELFRLTTKSGKLIVERDRVRMEGGGTSPLMQFEQD
PVQILDAMMPLYLNSQILRAMQESLASELAARMNAMSNVTDNAVELRKNL
SIVYNRERQAKITGEILEIVAGAEALT*
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