Tc07v2_t003010.1

Overview
NameTc07v2_t003010.1
Unique NameTc07v2_t003010.1
TypemRNA
OrganismTheobroma cacao (cacao)
Sequence length1134
Properties
Property NameValue
NoteATP synthase gamma chain 1, chloroplastic
Model evidenceSupporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
ProductATP synthase gamma chain 1, chloroplastic-like, transcript variant X2
Cross References
External references for this mRNA
DatabaseAccession
GeneID108662922
GenbankXM_018124663.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Tc07v2_g003010Tc07v2_g003010Theobroma cacaogene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Tc07v2_p003010.1Tc07v2_p003010.1Theobroma cacaopolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto360346auto360346Theobroma cacaoexon
exon-auto360347auto360347Theobroma cacaoexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto360348auto360348Theobroma cacaoCDS
CDS-auto360349auto360349Theobroma cacaoCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Tc07v2_t003010.1 ID=Tc07v2_t003010.1|Name=Tc07v2_t003010.1|organism=Theobroma cacao|type=mRNA|length=1134bp
ATGTATTCTTCAAATCTACCGACTTGGATCTCATCAAAACCTTCAAATTC
CAACAAAAATGTACTCTTTCATCAATTTTACCAAAACCCATTTCTCCAAT
TCCCTCAAATATTACCCCTCAAAAGCCTCTCTCAATCTCCTTCACCTTTT
GCTCCAGTTCAAAGCAGTCTTCGTGAGCTCCAAGAGCTGATTGCAACCGT
AAAAAACACTCAAAAAATCACTGAAGCAATGAAGCTGGTGGCAGCTGCAA
AGGTGAGGAGAGCTCAAGAAGCTGTCATCAATGGTAGGCCTTTTACTAAG
GCTTTAGTTGAGTTCCTTTACACCATTATTGAAAATTTACAATGTGAAGA
TATTGATTGTCCTTTAACTGTTATTAGACCTGTAAGGAAAGTAGCTCTCG
TTGTTGTAACTGGTGATAGGGATCTTTGTGGTAGTTTCAACAATGCAGTG
ATTAGAAAGGCTGAGTCCCGGATAGCGGAATTGAAAGGTCTTGGATTGGA
TTTTACTGTTATTAGTGTAGGGAAAAAGGGTAATTCTTATTTAAGGCGTA
GGGATCATGTTTCGGTTGACAGGTTTGTTGAAGGAGGAGGGTTTCCTACG
GCGAAAGAGGCTCAAATAATTGCTGATGATGTTTTTTCATTATTTGTTAC
TGAAGAGGTTGATAAGGTTGAGCTTGTATATACAAAGTTTGTATCTTTGG
TGAAGTCAGATCCAGTAATCCGTACTTTGCTTCCATTGTCAGTGAAAGGA
AAGGTTTTTGATGTGAATGGGACTTGTGTTGATGCTATGGAAGATGAGTT
GTTTAGGTTGACAACCAAGAGCGGGAAGCTGATCGTGGAGAGGGATAGGG
TGAGGATGGAAGGGGGGGGAACTTCACCTCTTATGCAGTTTGAGCAAGAT
CCAGTTCAGATTCTCGATGCCATGATGCCTCTCTATTTGAATAGTCAGAT
CTTGAGGGCAATGCAGGAATCATTGGCGAGTGAGCTGGCAGCTAGAATGA
ACGCAATGAGTAATGTTACTGATAATGCAGTTGAGTTGAGGAAGAATCTT
TCTATTGTTTATAATCGGGAACGACAGGCAAAAATCACTGGTGAGATTTT
GGAGATTGTTGCTGGAGCTGAGGCACTTACATAG
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protein sequence of Tc07v2_p003010.1

>Tc07v2_p003010.1 ID=Tc07v2_p003010.1|Name=Tc07v2_p003010.1|organism=Theobroma cacao|type=polypeptide|length=378bp
MYSSNLPTWISSKPSNSNKNVLFHQFYQNPFLQFPQILPLKSLSQSPSPF
APVQSSLRELQELIATVKNTQKITEAMKLVAAAKVRRAQEAVINGRPFTK
ALVEFLYTIIENLQCEDIDCPLTVIRPVRKVALVVVTGDRDLCGSFNNAV
IRKAESRIAELKGLGLDFTVISVGKKGNSYLRRRDHVSVDRFVEGGGFPT
AKEAQIIADDVFSLFVTEEVDKVELVYTKFVSLVKSDPVIRTLLPLSVKG
KVFDVNGTCVDAMEDELFRLTTKSGKLIVERDRVRMEGGGTSPLMQFEQD
PVQILDAMMPLYLNSQILRAMQESLASELAARMNAMSNVTDNAVELRKNL
SIVYNRERQAKITGEILEIVAGAEALT*
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